Salvia hispanica (chia): 125217577
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Entry
125217577 CDS
T09851
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125217577
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125217577
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125217577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
TRAF3_RING
TUNAR
zf-RING_13
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
125217577
NCBI-ProteinID:
XP_047975051
LinkDB
All DBs
Position
4:57128335..57132889
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AA seq
181 aa
AA seq
DB search
MDGPPVNDECSICQQNFQIPCQANCGHWFCGRCILQVWDFGHALRPCKCPLCRREITLLV
PSEAHRTADGAEILQRIEHYNRQFGAHPNSLMQRMYDLPFLLRRLTRDIMDPQRALPLVV
RARVYLAMILSAMYVLSPVDIIPEALLGIIGLLDDLIVVFMCFLYVAALYRTVLVSRHGG
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcctccggtgaacgatgaatgctcgatatgccagcagaacttccagattcct
tgtcaagccaattgcggccattggttctgcggtagatgtatcttacaagtttgggatttc
ggtcatgctcttcgcccctgcaaatgtccgctgtgtagacgtgagattacattgttggtt
cctagtgaggcacaccgcacggctgatggagctgagattttgcagaggatagaacattac
aaccgtcaatttggtgcacatcccaatagtctcatgcagagaatgtatgaccttcctttt
cttcttaggagattgacacgggatataatggatcctcagagagcacttccacttgttgtg
agagcacgtgtttatttggcaatgattcttagtgctatgtatgtccttagccctgtcgac
atcatccccgaagcactgctaggtatcatcggtttgctggatgatctgattgtcgttttc
atgtgcttcttgtatgttgctgccctttaccgaactgttctcgtttctcggcatggaggt
gcttga
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