Salvia hispanica (chia): 125217973
Help
Entry
125217973 CDS
T09851
Name
(RefSeq) protein GIGANTEA-like
KO
K12124
GIGANTEA
Organism
shis
Salvia hispanica (chia)
Pathway
shis04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
125217973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
125217973
NCBI-ProteinID:
XP_047975513
LinkDB
All DBs
Position
4:27550854..27558223
Genome browser
AA seq
1167 aa
AA seq
DB search
MATSNEKWIDNLQFSSLFWPPPQDVEQRKAQTTAYVEYFGQFTSEQFADDIAELIRSRYP
SKENRLFDDVLATFVLHHPEHGHAVLLPIISCIIDSTLEYDRSGPPFASFISLFCPNSEN
EYSEQWALACGEILRILTHYNRPIYKLERHENLSDRSSSGDHASTSKSIDGEPSSSPPSL
AERKPLRPLSPWITDILLATPLGIRSDYFRWCGGVMGKYAAGELKPPITATSRGSGKHPQ
LMPSTPRWAVANGAGVILSVCDEEVSRYETATLTAAAVPALLLPPPTTPTDEHLVAGLPA
LEPYARLFHRYYAIASPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDYATGMR
LPRNWMHLHFLRAIGIAMSMRAGIAADSAAALLFRILSQPALLFPPLRQVDGIEFPHQPL
GGYISSERKQQLELTAAEATVEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLSSSA
VDLPDIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSETCLMKIFVATVEAILQRTFPP
ESSREQTRKTRYIFGSASKNLAVAELRTMVHSLFLESCASVELASRLLFVVLTVCVSHEA
HPNSSKRPKGEKSHPEHVGEDGWKERESENNKQCKKQGPVAAFDSYVIAAVCALSCELQF
FPLISKGSSLLGARNGSDVAKPAKLNDLSSQLQSGIDSAVDHTRRILAILEALFSLKPSS
IGTSWSYSSNEIVAAAMVAAHVSDLFRRSKACMRALSTLVRCKWDSEIHSRASSLFNLID
IHSKVVASIVNKAEPLEAHLLHAPSLKEISSCFHGKKLANCGSCRHSEPGHPSSSPCEDL
PRSEDLVNHRKVDSGEAGRCTMGKGIADFPMDASDLANFLTMDRHIGFNCNGNVLLRSVL
AEKQELCFSVVSLLWHKLIVSPETQPSAESTSAQQGWRQVVAALCNVVSASPAKAATAVV
LQAERELKPWIAKDDDLGQKMWRVNQRIVKVIVELMRNHEAAESLVILASASDVLLRATD
GMLVDGEACTLPQLELLEVTARAVQAVLEWGESGLAVADGLSNLLKCRLSATVRCVSHPS
AHVRALSTSVLRAILHNGSVKPKSKLPDVNIIHNPRYQQYLNKIGTIDWQADIEKCLTWE
AHSRLATGLPIEFVGSAAKELGCAISV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcaaatgagaagtggatcgacaatttgcagttctcttcattattttggccg
cctccgcaagatgtagaacaaagaaaggctcaaaccactgcatatgttgaatatttcggg
cagttcacctcagaacaatttgctgatgatatagcagagttaatccgtagccggtatcca
tccaaggagaacaggctttttgacgatgttcttgcaacttttgttcttcaccatccagag
catggccatgctgttctacttcctattatttcatgtattatcgatagcacacttgaatat
gacagaagtggtccaccatttgcttctttcatttccctgttttgcccaaacagtgagaat
gagtattcggagcagtgggcccttgcatgcggggagatactaagaattttgacacactat
aacagaccaatttacaagttggaacgccacgaaaatttatccgatagaagtagcagcgga
gatcatgcttcaactagcaagtcaatagatggagaaccttcttcttcacctccctcactg
gctgagaggaaacctctgaggccactgtctccctggattactgatattttgcttgccacg
ccccttggtataaggagtgattattttcgatggtgtggaggtgttatgggaaaatatgcc
gctggagagctgaaaccgcctataactgctacttctcgtggatctgggaagcatccccag
cttatgccatcaactccgaggtgggctgttgctaatggtgctggagttatacttagtgtc
tgtgacgaggaagtttctcgctatgaaactgctaccttgactgcagctgctgttcctgca
cttctgcttccacctccaacaacacctacagatgaacatctagtcgctggtctgccagcg
cttgagccctatgcacgtctttttcacagatattatgcaattgctagtccaagtgccacc
caaaggctgcttcttggacttctagaggctccgccctcctgggctccagatgctcttgac
gctgctgtacaactagtggaacttcttcgagccgcagaagactatgccacaggcatgagg
ctccctaggaattggatgcacttgcattttctgcgagcaattgggattgcaatgtctatg
cgagctggaattgctgcagattctgcagctgccttacttttccgaatactttctcaacca
gctttacttttccccccactgagacaagttgatggtattgaattcccgcaccagcctcta
ggtggttatatttcatctgaaagaaagcagcaacttgaattgactgcagcagaagcaaca
gtagaagctactgcccaagggattgcatctatgctttgtgcacatggtccagaggttgaa
tggcgaatttgtacgatatgggaagctgcttatggtttgatacctttaagttcttctgca
gttgatcttccagatatcatagtcgcaacaccgctgcagcctccgatactatcatggaat
ttgtacattcctcttcttaaagtactcgaatatcttcctcgtggaagcccatctgaaacc
tgtcttatgaaaatatttgttgctactgttgaagcaattctacagaggacattcccacct
gagtcctctagagaacaaactaggaaaaccagatatatatttgggtctgcatccaagaat
cttgctgtggctgagcttcgcacaatggtccactcattattcttagagtcgtgtgcttct
gtagagcttgcctcccgccttctttttgttgttttaactgtgtgtgtcagccatgaagcg
catcccaacagtagcaagcgccccaaaggtgaaaaatctcatcccgaacatgtcggtgaa
gacggatggaaggagagagaatcggaaaataataaacagtgcaagaaacagggccctgta
gctgcatttgattcttatgtcattgctgctgtctgtgccttgtcatgtgaactccagttc
ttccctttgatctctaaaggaagtagtcttttaggtgctagaaatggttctgacgttgct
aagcctgcaaaactgaatgacctgtccagtcagttgcagagtggtattgattcagctgtt
gatcacactcgcagaatattagcaattctagaggcccttttttctttgaaaccgtcttcg
attggcacttcatggagttacagttcaaatgaaatagtggctgctgctatggttgcagct
catgtttctgatttgtttagacgctcaaaagcatgcatgcgtgctctttccaccctggtg
agatgcaagtgggatagtgaaattcactctagggcgtcttccctcttcaatttgattgat
attcacagcaaagttgttgcgtctatagtcaacaaagcagagccattagaggctcaccta
ctccatgcgccatcgctgaaggaaatatcttcatgttttcatggaaaaaagcttgcaaat
tgcggtagctgtcgccactcagaaccaggacatccatcttcatccccgtgtgaagacttg
ccccgttctgaagatttggttaatcataggaaggttgattctggcgaagctggaagatgt
acaatgggcaaaggaattgcggatttccctatggatgcttcagatttggccaacttcttg
actatggacaggcatataggatttaattgcaacggcaatgttcttctgaggtctgtcctt
gctgaaaagcaagaactgtgtttttcagttgtttcattgctttggcacaaattgattgta
tcacccgagacacaaccaagtgctgagagcacgtctgcccagcaaggatggagacaggtg
gtggctgcactctgcaatgtagtatcggcatcaccagcaaaagctgcaacagccgttgtc
cttcaggcggaaagggaattgaaaccatggatcgctaaagatgatgatcttgggcaaaaa
atgtggagagtcaaccagagaatcgtgaaagtgattgtcgagttaatgaggaaccatgag
gcagccgagtcgctagtaattcttgctagcgcatcagacgtcctcctccgtgccacagac
gggatgcttgttgatggagaagcatgcactttacctcagctggagcttctggaagtaacg
gcgagagcagttcaagccgtgcttgaatggggagaatcaggattagcagttgcagatggc
ctctcaaacctgttgaagtgtcgcctctcagccaccgttcgctgcgtctctcacccgagc
gctcatgtccgggcgctgagcacctcagttctccgtgcaatcctacacaacgggtcggtg
aaaccaaagagcaaactaccggacgtgaacataatccacaatccgcggtatcagcagtac
ttgaacaagataggcaccattgactggcaagctgacattgagaagtgcttgacgtgggaa
gcgcacagccggcttgcaacggggctgcccatcgagtttgtggggtcggctgcgaaggag
ttagggtgtgctatatctgtgtga
DBGET
integrated database retrieval system