Salvia hispanica (chia): 125218028
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Entry
125218028 CDS
T09851
Name
(RefSeq) LOW QUALITY PROTEIN: auxin response factor 5-like
KO
K14486
auxin response factor
Organism
shis
Salvia hispanica (chia)
Pathway
shis04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125218028
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
125218028
NCBI-ProteinID:
XP_047975579
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Position
4:24565071..24569850
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AA seq
759 aa
AA seq
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MASVEEKQKPGGLVNGGSNVIDSMKLLKEMQDTGVKKPINSELWHACAGPLVTLPQVGSL
VYYFPQGHSEQVAVSTNRSPTTQIPNYPNLPTQLLCQVHNVTLHADKETDEIYAQMSLQC
VNSEKDVIPIPDFGLKPSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQP
PTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSMFVGAKRLRAGDAVLFIRDEKSQLL
LGVRRANRQQTTLPSSVLSADSMHIGILAAAAHAAANRSPFTIFYNPRACPSEFVIPLAK
YRKAVFGTQLSIGMRFGIMFETEESTKRRYMGTIIGISDIDPLRWPNSKWRSLQVEWDEP
GCGDKQNRVSPWEVETPESLFIFPSLTANMKRPFHSAFIGAPPPEWDSLMNGSVPFQTSP
CGTQSRLEAHSLQTPTVDPSHAESTIANASVDFSPYPMMCPSPPPGLFRNTGSLSVFKKP
DQSPMSSEVAYSMMLPSVGQELWDGQFSNPKCAALPVLLPHHDISNFQYGSNVLKDLSDD
KHNQSDIYSCLNLDGSNSGSTVIDPSSVSSTILDDFSALKNMDFSNPSDYMVGGFCSTQD
VQSQITSASLADSRTFSVQEYADNSGGASSSNVDFDDILQQSSFQQVTPRFRTYTKIQKA
GSVGRSIDVSSFKTYNQLRSEIERMFGLEGLLNDPGSGWKLVYVDFESDVLLVGDDPWEE
FVGCVRCIRILSPAEVKQMGEEGMQLLNSAAGRGIQLEY
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgttgaagagaagcagaagccaggaggtttggtgaatgggggaagcaatgta
attgatagcatgaaattgttgaaagaaatgcaagacactggagtaaagaagccaataaac
tcagagctgtggcatgcctgtgccggtccactggtcaccttgcctcaggtggggagcctt
gtatactatttccctcaaggccatagcgagcaggttgccgtttccacgaataggtcacca
acgacacaaatacccaactatccgaatctccctacacagttgttgtgccaagttcacaat
gttacactgcatgctgacaaagaaaccgatgagatctacgcccagatgagcctgcaatgc
gtaaattctgaaaaggatgttatacctatacccgattttggactgaagcctagtaaacat
ccaactgagttcttttgtaaaacattgacggccagcgatacaagcacacatggcggcttt
tcagttcctcggagggctgctgaaaagctcttcccgcaactagattactcgatgcaacct
ccaactcaagaactagtagtccgggatttgcatgataacacgtggacttttcgtcacata
taccgggggcagccaaaacggcaccttttgacaactggctggagtatgtttgttggagca
aagaggcttcgagcaggtgatgcggttctgtttatcagagatgagaaatcacagctgtta
ctgggtgtgaggcgcgccaaccgtcagcaaacgactctgccatcttccgttctgtctgct
gacagcatgcacataggaatccttgctgctgctgctcatgctgctgctaatagaagcccg
tttacaatcttctacaatccgagggcatgcccctcggagtttgtcattccgttggctaaa
tatagaaaagcagtttttgggacgcagctgtctattggtatgaggttcggcattatgttt
gaaaccgaagaatccactaaacggagatacatgggcacgatcataggaataagcgacata
gatccattaagatggcccaactcgaagtggcgtagtcttcaggtggagtgggacgagcct
ggatgcggtgataagcagaatcgagttagcccttgggaggtcgagactcccgagagcctc
ttcatatttccatctctaaccgcaaacatgaaacgccctttccactcggctttcatagga
gcaccaccacccgaatgggattctttaatgaatggctccgtgcctttccaaacgagtccg
tgtggaacacaatcacgcctggaggcacacagtcttcaaactccaacggtcgatccatcc
cacgctgaatctactattgccaacgcctcggtcgattttagcccatacccgatgatgtgt
ccgtctcctccccccggattgtttagaaatacgggatccttgtccgtgttcaagaaaccc
gaccagtctccaatgtcgtctgaagtggcttactcgatgatgctgccttcagtcggacaa
gagctatgggacggccaatttagcaaccccaagtgcgctgctcttcccgtgctgctgcct
catcacgacatttcgaacttccagtacggttcgaatgttttgaaagacttgtcagatgat
aagcacaaccaaagtgacatatacagctgtctcaatcttgacgggagtaacagcgggagc
acggtgatcgacccttcttccgtctctagcaccatcttggacgacttctccgccctcaag
aacatggatttctcgaacccctcggattacatggtggggggcttctgctcgacccaagac
gtccaatcgcagatcacgtcggccagcttagcagactcgcggacgttctccgtacaggaa
tacgctgacaactcgggcggggcatcatccagcaacgtcgacttcgatgacatcctgcag
cagagctccttccagcaagtcactcctaggttccggacctacacaaagattcagaaggcg
ggatcggtggggaggtcgattgacgtgtcgagcttcaaaacgtacaaccagctgcggtcg
gagattgaacgcatgttcgggctggagggcctgctgaacgaccctggctcgggatggaag
ctcgtgtacgtggactttgagagcgacgtgcttctcgttggggacgatccgtgggaggag
tttgttgggtgtgttcgatgcataaggattctgtcgccggcggaggtgaagcagatgggg
gaggaggggatgcagctgctcaactccgcggcggggagggggattcaacttgaatattag
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