Salvia hispanica (chia): 125218033
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Entry
125218033 CDS
T09851
Name
(RefSeq) tip elongation aberrant protein 1-like isoform X1
KO
K20285
Rab9 effector protein with kelch motifs
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125218033
Membrane trafficking [BR:
shis04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
125218033
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_5
Kelch_1
Kelch_2
Kelch_6
NANM
Motif
Other DBs
NCBI-GeneID:
125218033
NCBI-ProteinID:
XP_047975583
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Position
4:complement(35576762..35580063)
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AA seq
641 aa
AA seq
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MKDSKINLMECLGGGGEVARNNAMLVYPKMMGANPSERWGHSACYFNGLIYIFGGCRGGV
HFSDVLVCNLATMSWNVLKTTGQGPGPRDSHSAVLVGHKMLVFGGSNGCRKVNEFHILDL
LSREWARPECHGDPPCARESHTANVVGDEKMVIFGGSGEGEANYLNDLHVLDLNTMEWSS
PEVKGSVPAPRDSHIAVAVGHRLFMFGGDSGYRAQGDVNVLDMNKVVWSKLETHGASPGA
RAGHAAVSIGTKVYVLGGVGDKPCYNDIWVLDVITSSWVQLDINSPKSQGRFSHTATVTN
LGIAIFGGCGEDERPLNELLVLQIDSQTCRAFGNTYKEEIKKISLTNKAENNLKKTIFVV
DNEDSTSQQVEELELVPKQAFRFGSGRLHPKRRRTSNSKQPEDTLELKEHSISLSQQSSP
SSQSDHEQAMQKNTGNSYSSPRVHMMFRQNASTPNCFQPPSNQASSRHAVSRTFPEIYPS
LDHPNQVKPEHKNVICSDACRVQCNAAESLSLGKTRNLMGAEVRGQVDGTFDSGYLMTAT
VNGKVFRGVLFAAGPDLVTRGATFSHHPHSSPHASNVQNPIVAFPRHPVKVVGHVSEQAQ
LRRLSPERRASLPIAKESRAKSELQGVVLTLASPGSDRSRI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatagcaaaataaacttgatggagtgtttgggtggaggaggtgaagttgcaaga
aataatgcaatgttggtttatccaaagatgatgggtgccaacccttctgaaagatgggga
cattcagcttgctacttcaatggcttgatttacatttttggaggatgtcgcgggggcgtg
catttcagcgacgtgctggtctgcaatcttgcaacgatgagctggaacgttctcaagaca
acgggccaggggccggggccgagggacagccacagcgccgtgcttgtgggccacaagatg
ctagtgtttggaggctctaatggatgcaggaaggtgaatgaattccacatattggatctg
ctctcgagggagtgggcccgccccgagtgccacggagatccgccttgtgctcgggagagc
cacacggccaacgttgttggtgacgagaagatggtcatctttgggggaagtggagaaggg
gaggctaattatttgaatgacttgcatgtcttggacctcaacactatggagtggtcttct
cccgaggtgaaggggagtgtacccgcccctcgtgacagccacatcgcggtggctgttggc
caccgccttttcatgtttggtggtgactctggttatagagctcaaggagatgttaatgtg
ttggacatgaataaagtggtttggtctaagttggaaactcacggagcttcacccggtgct
cgtgcagggcatgctgctgtaagcataggcaccaaggtgtatgtgctcgggggagttggt
gataagccatgctacaatgatatatgggttcttgatgtgataacgtcttcgtgggttcaa
ctcgatatcaattcaccgaaatctcaagggagattctctcatacagccactgtcacaaat
ttgggcattgccatatttggagggtgtggagaggacgaacgccctttaaatgaattactc
gttctgcagattgactcgcaaacgtgcagggcttttggaaacacgtataaagaagaaatc
aagaagatttcactcaccaacaaagctgagaataatttgaagaagacgatatttgtagtc
gacaatgaagattcaacatcacagcaagtcgaggagcttgagctcgttccaaagcaggct
tttcgttttggttctgggaggttgcatccgaagaggcgaagaactagcaattcaaagcaa
cctgaagatacactggagctcaaagaacattctatttcactgtcacagcaatcatccccg
tcgtcccaatctgatcacgagcaggctatgcagaaaaacacgggcaactcctactcttct
ccccgagttcacatgatgttcaggcagaacgcctccactccaaactgtttccagccgcct
tcaaatcaggccagctccaggcacgcagtttctagaactttcccggagatatatccatca
ttggaccatccaaatcaagtcaaaccggaacataagaacgtgatctgcagtgatgcatgt
cgagtgcagtgcaatgctgcagaatcattatctctagggaaaacaagaaatctgatgggg
gcagaggtacgtggtcaggttgatgggacgttcgactcaggctacctcatgacggcaact
gtgaatgggaaagtgtttcgaggggtgttatttgctgcaggacctgatcttgttacgcgt
ggcgccactttcagccaccatcctcattcttcccctcacgctagcaatgtacaaaatccc
atagtggcgtttccaaggcatccggtgaaggtggttggacacgtctctgaacaagcgcaa
ctcagaaggttgtcccccgagagacgagcctctcttcctattgcgaaggagtcgagggct
aaaagtgagctacaaggtgtagtcttaactctggcgagtcccgggagtgaccgcagtagg
atttag
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