Salvia hispanica (chia): 125218114
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Entry
125218114 CDS
T09851
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
shis
Salvia hispanica (chia)
Pathway
shis04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125218114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125218114
Membrane trafficking [BR:
shis04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125218114
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
PCRF
Motif
Other DBs
NCBI-GeneID:
125218114
NCBI-ProteinID:
XP_047975671
LinkDB
All DBs
Position
4:complement(24138289..24142574)
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AA seq
568 aa
AA seq
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MVLISVVRDYINRMLHDISGMKVLILDSQTVSVVSVVYSQSELLQKEVFLVELVDSISMS
KEPMMHLKAVYFLRPTSENVVLVRRQLNHPRFGEYHLFFSNMLKDTQLHNLADADEHEVV
QQVQEFYADFVALDSHHFSLNIPSNHMYMLPAVVDPSGLQHFCDQAIDGIAAIFLALKRR
PVIRYSQTSDIAKRIAQEAMKLMYQQESGLFDFRRSEVSPLLLILDRRDDPVTPLLNQWT
YQAMVHELIGIQDNKVDLRNIGKASKDHKEVVLSSEQDPFFKANMYENFGDIGMNIKKLV
DDFQQIAKSNQNIQTIEDMAKFVDNYPEYRKMHGNVSKHVTLVTEMSRIVEERKLMLVSQ
TEQDLACNGGQGAAFEAVTNLLNNENVSDIDRLRLVMLYALRYEKESPVQLMQLFNKLAA
QSPKYKPGLVQFLLKQAGVDRRTGDLYGNRDLLNYALNMARGLKGVENVYTQHQPLLSQT
MESITKGRMRDVDYPYIGNHFQQARPQDVIIFIVGGTTYEEARVVSLQNATNSGIRFILG
GSAILNSKRFLRDLEEAQRIIRTSTNVI
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgatttcggttgtacgagattacatcaatcgaatgctacatgacatttccggc
atgaaagttctcatcctcgactctcaaacggttagcgttgtgagtgttgtgtattcacag
tcagagctgcttcagaaagaagtgtttcttgtggagcttgtggattcaatttcgatgtca
aaagaacccatgatgcacctgaaagctgtctattttctccgtccaacatctgagaacgta
gttcttgtgagacgtcagctgaatcatcctcggtttggagagtaccacctatttttctcc
aatatgttgaaagacactcagctgcacaatttggctgacgcagatgagcatgaagtagtt
caacaagtgcaggagttctatgctgactttgttgcacttgattcccatcatttctcctta
aatattccatcaaaccatatgtatatgcttccagccgtggtggatccatcaggtttacag
cacttttgtgaccaagctattgatgggattgctgccatcttcctggctctaaaacgtaga
cctgttattcgttattcacagacatctgatatagccaaaaggatagcacaagaagcgatg
aagctgatgtatcagcaggagagtggtctttttgattttcggcgttcagaggtttctccg
ttgttgcttattctcgataggcgagatgatccagtgactcctcttctcaatcaatggaca
tatcaggccatggttcatgaattaataggcattcaagacaataaagtagatctcagaaac
attggcaaggcatcaaaggaccacaaggaggttgtactgtcttctgagcaagatcccttt
ttcaaagccaacatgtatgagaattttggagatattgggatgaatataaaaaagttggtg
gatgatttccagcaaattgcaaaaagtaatcagaatatccagacaatagaggacatggct
aaatttgttgacaactacccagaatacagaaaaatgcatggcaatgtttccaagcatgtg
acattggttaccgaaatgagtaggattgttgaagagcggaaactaatgttagtctcacaa
acagaacaagatttagcctgtaatggtgggcaaggggcagcgtttgaggctgttacaaac
ctgttaaataatgaaaatgtctcggatattgaccgactgcgcttagtcatgctgtatgct
ttgcggtatgagaaagaaagccccgtccagctgatgcaattattcaataaattggcagct
caatctccgaagtataaaccagggcttgtgcaattcctactgaagcaagctggtgttgat
aggcgaactggagatctttatgggaacagagatctgctcaattatgctcttaatatggct
cgcggactcaaaggagtggagaatgtatacactcagcatcagcccctgctatctcagacg
atggagagcattactaaaggacgtatgagagatgtggactacccttacatcggaaaccat
ttccaacaagctaggcctcaggatgtcataattttcattgtgggcggaactacttatgag
gaggcccgcgtggtttccctccaaaacgctacgaattctggaattcgtttcatccttggt
ggttcagcaatcctcaattcaaagaggtttctgagggacctcgaggaagcacagagaatc
attcggacaagcacaaatgtgatatga
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