Salvia hispanica (chia): 125218316
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Entry
125218316 CDS
T09851
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125218316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125218316
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125218316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_Nup35
ERO1
Motif
Other DBs
NCBI-GeneID:
125218316
NCBI-ProteinID:
XP_047975919
LinkDB
All DBs
Position
4:29110694..29113100
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AA seq
373 aa
AA seq
DB search
MDDSEQNKLFVGGISWDTTDDVLRDHFGNYGVVLGSVIARDRDSGRPRGFAFVTFSESSA
VDRALQDSHQILSRTVEVKRAIPRSEQQSQQHNNRGLSRNNSRANCRSNEQFRTKKIFVG
GLSANLTEEEFRGYFENFGRITDVVVMHDNLTHRPRGFGFITFDSEDSVEEVMQKNFHEL
TGKLVEVKRAVPKDGLGSGSVGYNGRLGGGRSPTSFNSYQQGSYTPYSSRFGYFPGYGGN
VAGYPYGAGIFGGGYPPSGGYGGISYGLAPIAPRSPWNPAMVGVRGSFLPYGSCAPVYPS
YVNGGPGVMGLSINGYGGILGGDAQHTAESTPPQTGINNVDANSFGSGRNFGGVASKQSH
RVSDMSYQAANSS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcggagcagaataagctgtttgtcgggggcatttcgtgggacacgacggac
gatgtgctcagggaccatttcggcaactacggcgtcgttttgggctccgtgattgctcgg
gatcgggattccggtcgccccaggggcttcgctttcgtcaccttttccgaatcttccgcc
gtcgaccgcgctctgcaggattcccatcaaattctcagcagaacggtggaagtcaaaagg
gccattcccagaagcgaacaacaaagtcaacaacacaataacaggggattgagtaggaat
aacagtagggctaactgtaggagcaacgagcagtttaggacgaagaagatttttgtaggg
ggtttatcggctaacttgactgaagaagaattcagaggttactttgagaactttggtagg
attactgatgtagttgtgatgcatgataatctgactcataggccgaggggatttggtttt
attacctttgactcagaggattctgtagaggaagttatgcagaagaatttccacgaattg
actggaaagcttgttgaggttaaaagggctgtgccaaaggatggacttggtagtggtagc
gttggttataatggaagattaggtggcggaaggagccctactagcttcaattcttatcag
caggggagttacacaccttatagttctagatttgggtatttccctggttacggtggtaat
gtggctggctacccatatggagctgggatatttggtggtggatatcctccttctggaggg
tatggtggaattagttacggtctcgctccaattgctccgaggagtccttggaatccagcg
atggttggtgtcaggggaagtttcctgccttatggaagttgtgctcctgtctatccctcc
tatgtgaatggcgggcctggagtgatgggactgtctattaacggatatggtgggatcttg
ggtggagatgctcaacacacagctgaatcaacaccccctcagactggtataaataatgta
gatgccaattcttttggttctggaagaaactttggaggtgtggctagcaaacagagtcac
agagttagtgatatgtcttaccaagctgctaactcaagctga
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