Salvia hispanica (chia): 125218400
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Entry
125218400 CDS
T09851
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shis03400
]
125218400
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125218400
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
Motif
Other DBs
NCBI-GeneID:
125218400
NCBI-ProteinID:
XP_047976017
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Position
4:52695168..52700135
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AA seq
605 aa
AA seq
DB search
MGVGGHFWDLLKPYARFQGFDFLRNKRVAVDLSYWIVQQETAIKGYIRNSHIRTTFFRTV
NLFSKFGAYPVFVLDGTPSPLKSQARIMRYFRSSGMDMSSLPEAEKGVSVERNRAFKKCI
EECVELLELLGMPILKAKGEAEALCAQLNREGHVDACITADSDAFLYGAQCVVKRIQPNS
KEPFECYHISDIETGLGLRRNHLIAISLMVGSDHDLNGINGIGLETAVRFVKIFSEDEIL
NRLHDVAKGEPLVIQGHNTAEDESASCSNDKSLKLRIPHCSHCGHPGNKKAHLKFSCEHC
NSTAGQSCSHKPAGFKCLCTSCDLDREEKAKQKDASWKLTVCRKIASQENFPNDEIVQMY
LSNHNGIDDRPHLRWASPNTEMLVDYLAYQQHWEPSYIRQRILPMLSTLYLRDMASAPTS
DLLYGSYKFHSIQRVKTRYGHQSYVVKWKKAAASLRDAANPIPQESDLPLVVDLDEPFDL
TEDTDAPYIHIENGGCFLSTDEDMELVQKAFPEEANQFLKEKELKEMVLKRKKSNSGTEA
TPEKTESSTSSGVQLSIKEFYRSSKLRNSSKPEEDSEKGSGSSNDKRRDPSPRFSKSARR
RLLFD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgggggttggaggccacttctgggatttgctcaaaccctacgcccgattccaaggcttt
gatttcctcagaaacaaacgcgttgcagtggatttgtcgtattggattgtgcagcaggag
accgccattaaagggtacattagaaactcccatattcgcacaacctttttccgaacggtc
aatcttttctccaagtttggagcctacccggtctttgtactcgatgggactccgtccccg
ttaaaatctcaggcaaggataatgcggtacttccgatcatctggtatggacatgtcaagt
ttgccagaagcagagaaaggtgtatcagttgaaaggaatcgagcctttaagaaatgtatt
gaagaatgtgtggaattgctcgaactccttggaatgcctatattgaaagccaaaggagaa
gctgaagctctctgtgctcagttaaatagggaaggacatgtcgatgcttgtatcactgct
gacagtgatgcatttctatatggtgcccagtgtgtggtaaagcgaatccagccaaactcg
aaagagccgtttgagtgctaccatatatctgatattgagacaggtcttggtctaaggaga
aatcacttgatagctatttctttgatggttggaagcgatcatgatttaaatggtataaat
ggaattgggcttgaaactgcagttcgctttgtcaaaatttttagtgaagatgaaatattg
aacaggctgcatgacgtagccaaaggagaaccactggtgatccagggacacaatactgct
gaagatgaatctgcaagctgttcgaatgataaatccttgaagctaagaatacctcactgt
tctcactgtggccatccaggaaataaaaaagcccatctcaagttttcttgtgaacattgc
aactcaactgctggccagagttgttctcacaaaccagccggattcaaatgtttgtgcact
tcatgtgacttggacagagaagaaaaagctaagcagaaagacgcctcctggaaacttaca
gtttgccgaaagattgcatcacaggaaaattttccaaatgatgaaattgtacagatgtac
ctgagcaaccataatggaattgacgataggccacatttacgatgggcaagtcccaacacg
gaaatgctggttgattaccttgcttatcagcaacactgggaaccatcttatattaggcaa
agaatactaccaatgttatcaacattatatttacgagatatggcctcagccccaaccagt
gacttactatatggatcgtacaagtttcatagcattcagcgtgttaagacaagatacgga
catcaatcctatgttgttaaatggaagaaggctgctgccagtttgagggatgctgccaac
ccaattcctcaagaatctgatttaccgttggtagtagacctcgatgaaccttttgatttg
actgaagatacggatgctccttatattcatattgaaaatggaggttgttttttgtcgact
gatgaagatatggagcttgtacagaaggcttttccagaggaagccaaccaatttttgaag
gaaaaggagttgaaagaaatggtgttgaaaagaaagaaatcaaactcgggcactgaagca
acacctgaaaaaacagaatcatccacatccagcggagtgcagctaagcattaaagagttt
tatcgttcctccaaactgcgtaactcaagcaagcctgaggaggattccgagaagggatct
ggttcctccaacgacaaaaggagagatccaagtccaagattttccaagtccgccagacgg
cgccttctatttgattga
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