Salvia hispanica (chia): 125218606
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Entry
125218606 CDS
T09851
Name
(RefSeq) programmed cell death protein 2-like isoform X1
KO
K14801
pre-rRNA-processing protein TSR4
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125218606
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
125218606
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDCD2_C
zf-MYND
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
125218606
NCBI-ProteinID:
XP_047976260
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Position
4:43070736..43074212
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AA seq
397 aa
AA seq
DB search
MDTDFESLQISSLSEVDEGNVVEDADSDEIDDDEEDQIPMTLGFAEEPRNPWSSRRQYFP
SKAGGSPAWLDPINLPSGRSSLCDFCHEPLQFLLQVYAPLPEESTFHRTLFVFMCSSMPC
LLRDQHEQWRRSPEVQSRSIKVFRCQLPRVNPFYSSEAPAEDGSQQPLTAGAMLCDWCQS
WKGDKVCSSCRRVRYCSGNHQAAHWRSSSSSHRVLCQQLQPSGMESELAASNFLWPEYEI
TCEDESEFDEPISSENGSGNALVSRSRTEGSDGNLMNNFQASDDNSSWASFQERISSAPE
QVLRYSSSSQAKPLWPVSSGRPSRADIPRCNHCGGTRAFEFQVLPQILYFFHVEDDRDSI
DWATIAVYTCEASCEGGASYKEEFAWVQLASQSISHQ
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatttcgaatctttgcagatatcatctctcagtgaggtggatgagggcaac
gtcgtagaggatgcagacagtgatgaaattgacgacgatgaagaggaccagattcctatg
actttaggatttgcggaggagcctagaaatccttggtcatcgcgccgccaatacttcccg
agtaaagctggtggttcaccggcatggttggatcccattaatttgccttcgggaagatcc
agtctttgtgatttttgccatgagcctttgcagtttctgcttcaggtttacgcgcctttg
cctgaggaatcaacttttcaccgaacattgttcgttttcatgtgttcgtcaatgccctgc
cttcttcgtgatcagcatgagcagtggaggcgatctccagaagtccagtccagaagtatc
aaggtttttcggtgccaattgccacgggtgaaccccttctattctagtgaggcgcctgct
gaagatgggagccagcagccattgacagctggagcaatgctatgtgattggtgtcagtca
tggaaaggagacaaagtttgtagtagctgtagaagagtgcgctattgttctgggaatcac
caggctgctcactggcgatccagtagctcaagtcatagagtcctatgccaacagttgcag
ccgtctggcatggagtctgaattagctgcaagcaatttcctgtggcccgagtatgagatc
acatgtgaggatgagtctgaatttgatgagccaatatccagtgaaaatggatctggtaat
gcattggtttctagaagccggacagagggttctgatggaaatcttatgaataatttccag
gcatctgatgacaacagtagttgggcatctttccaagagagaatatcttcagctcccgaa
caagtcttaagatactctagctcctctcaagcaaagccattatggcccgtttctagtggc
cggccgtcaagagccgatattcctaggtgcaaccattgtggcggcacacgtgcttttgaa
tttcaggttctaccccagatactctacttcttccatgttgaagacgacagagattctatc
gactgggccaccatcgccgtttacacatgtgaggcctcatgtgaaggaggtgcgagttac
aaagaggaattcgcttgggttcaacttgctagtcagtctatatcccaccaatga
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