KEGG   Salvia hispanica (chia): 125218623
Entry
125218623         CDS       T09851                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
shis  Salvia hispanica (chia)
Pathway
shis03083  Polycomb repressive complex
shis04120  Ubiquitin mediated proteolysis
shis04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125218623
   04120 Ubiquitin mediated proteolysis
    125218623
  09126 Chromosome
   03083 Polycomb repressive complex
    125218623
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:shis04131]
    125218623
   04121 Ubiquitin system [BR:shis04121]
    125218623
   03036 Chromosome and associated proteins [BR:shis03036]
    125218623
Membrane trafficking [BR:shis04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    125218623
Ubiquitin system [BR:shis04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     125218623
   Cul7 complex
     125218623
Chromosome and associated proteins [BR:shis03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     125218623
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     125218623
SSDB
Motif
Pfam: Skp1 Skp1_POZ Nup84_Nup100 DUF787 Pollen_allerg_2
Other DBs
NCBI-GeneID: 125218623
NCBI-ProteinID: XP_047976291
LinkDB
Position
4:10295265..10297682
AA seq 164 aa
MASASENTGKKITLRSSDGEVFEVDEAVAVESQTIKHMIEDDCVDNIIPIPNVTGKILSK
VMEYCKKHVDASASTKSEDKVSSDDELKIFDADFVKVDQATLFDLILAANYLNIKSLLDL
TCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq 495 nt   +upstreamnt  +downstreamnt
atggcatccgcatcggagaacaccggcaagaagatcacactccgaagctccgatggcgag
gtgtttgaggtggacgaggcggtagccgtggagtctcagacgatcaagcacatgatcgag
gatgactgcgtcgacaacatcattccgatccccaacgtcaccggaaaaattctctccaaa
gtcatggagtactgtaaaaagcacgtcgatgcctctgcttcaaccaagtccgaggacaag
gtctcctctgacgacgaactcaagattttcgacgccgacttcgtcaaagtcgatcaggcc
acgctgttcgaccttattttggctgcgaactatctgaatatcaagagccttttggatttg
acttgccaaacagttgctgacatgatcaagggaaaaactccagaggagatcaggaaaaca
ttcaacatcaagaatgattttactcctgaagaagaagaagaagtccggagagagaaccaa
tgggctttcgagtag

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