Salvia hispanica (chia): 125218881
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Entry
125218881 CDS
T09851
Name
(RefSeq) syntaxin-43-like isoform X1
KO
K08489
syntaxin 16
Organism
shis
Salvia hispanica (chia)
Pathway
shis04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
125218881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125218881
Membrane trafficking [BR:
shis04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
125218881
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Ortholog
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GFIT
Motif
Pfam:
SNARE
Syntaxin_2
Prominin
MCPsignal
Motif
Other DBs
NCBI-GeneID:
125218881
NCBI-ProteinID:
XP_047976628
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Position
4:complement(34136581..34140827)
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AA seq
321 aa
AA seq
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MATRNRTILFRRYRDALKSVRVPAGSSSSGGRAVIELSTTSLLNPNRSYTPISTEDPGTS
SRGTVAVGLPPAWVDVSEEIATNIQRVRGKMADLSKAHAKALMPSFGDGKEDQRHIEALT
LEITDLLKKSEKRLQRLSVGGPSEDSNIRKNVQRSLATDLQTLSMELRKKQSVYLKRIRQ
QKEGSDGVDLEMNLNGNKSTRDDDDDDIDDIGFSEHQIARLKKSEAFTVEREREIQQVVQ
SVNELAQIMKDLSVLVIDQGTIVDRIDYNITNVAATVEDGLKQLQKAERNQKQGGMVMCA
TILIIMCFVMLVLLVLKEIIF
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaggaatcggacgattctgtttagaaggtatagggatgcgttgaagagcgtc
agagttccggcgggctcgtcgagctccggcggaagagcggtgatcgagctctcgacaacg
tcgttgcttaaccctaaccgatcttacactcctattagcactgaagatcccggaacctcc
agcaggggaacagttgcagtaggtttaccgccagcttgggtggatgtatctgaagaaata
gcgactaacatacaacgtgtgagagggaagatggctgatttatcgaaggctcatgccaag
gctttaatgccttcatttggggatggtaaagaggatcaacgccatattgaggcactaaca
ctagagataactgatcttttgaaaaaatcagagaaaagattacaaagactctcggttggt
gggccatcagaggattcaaatatcaggaaaaatgtccagcgttcattagctaccgacctt
cagaccctctcaatggagctacgcaagaaacagtcagtatatttgaaacggattcggcag
cagaaagagggttctgatggggttgacttagaaatgaatctaaatggcaacaagtcaaca
agggatgatgatgatgatgatattgatgacataggattcagtgaacatcaaattgccaga
ctaaagaaaagtgaggcattcactgtagagagggagagagaaattcaacaggtggtgcaa
tcagtcaatgaacttgctcaaattatgaaggatttgtcagttttagtcattgatcagggt
actattgttgacaggatcgattacaacataacaaatgttgcagccacagttgaagatggt
ttgaaacaacttcagaaggctgagagaaatcaaaaacaaggtggcatggttatgtgtgcg
acgattcttatcatcatgtgctttgtgatgctagtactcttagttttgaaggagatcatc
ttctaa
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