Salvia hispanica (chia): 125218914
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Entry
125218914 CDS
T09851
Name
(RefSeq) tRNA pseudouridine synthase Pus10-like
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shis03016
]
125218914
Enzymes [BR:
shis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
125218914
Transfer RNA biogenesis [BR:
shis03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
125218914
BRITE hierarchy
Motif
Pfam:
Pus10_C
Pus10_N_euk
Phlebovirus_G1
Motif
Other DBs
NCBI-GeneID:
125218914
NCBI-ProteinID:
XP_047976674
LinkDB
All DBs
Position
4:24342960..24347260
Genome browser
AA seq
556 aa
AA seq
DB search
MASNGAALHSDTTTAHVSSAAGTDNDDLVFLRRAARSLPPPVLKDLLSNGVCARCILKQF
GLHEHICSRPSVTTPLLDVILREVAEHGDAGAANGSVGESKDMVNVEQDLQEVCRVCLGI
LQFLYIDDNGISVKKSHACDFAAAVADPVNQGGYQIDSFCLQVSLPPVVVDNEQAVWSYI
KEKYSSESWFTEKFPSSGITVKDFLKLSITNPLEKLLDVKCNENSFRVQLTYTLSDALSE
KEPISESNGCYKRRKIDDTDTLKNSSDLQKVESHDLTSKSSNGCKGDQAGLSKFPLEKVN
GNGCCSLVFQCYKTSVYVGGRYLKYSRNVSQSRWIIDDERMGEASVEEIVGSNILPICQG
DKYKFHAAGREDIDVRMLGTGRPFLVEILNARQFPSDLLIKEIETKINSLESKLVQVKNL
RFLGSQGWELMREGEAEKQKQYVALVWISRPFENEDEQKLSSFTDLKVLQKTPVRVLHRR
SPLEREKIIHWMKIEKIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTYPNVGSILGCRAE
ILQLDVTDVKMDCFQA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaacggcgccgcacttcacagtgataccacaaccgcgcacgttagctccgcc
gctggaactgacaatgacgacctagtgttcctccgccgcgccgcccgctctctgccgccg
ccagtcctcaaggacttgctgtccaatggcgtttgtgcacgctgtatacttaagcaattt
ggtctacacgagcatatatgttctcgtccttcggttacaacacctcttctggatgtgatt
cttcgcgaagtggcagagcatggtgatgctggagctgctaatggtagtgttggggaaagt
aaagatatggttaacgtagaacaagatttacaggaggtttgcagggtttgtctaggcatt
ttgcagttcctatatattgatgacaatggaatttcggtgaaaaagagtcatgcttgcgat
tttgctgcagcagttgcagaccctgtaaaccaagggggctatcaaattgatagcttctgt
ctccaagtgtccctgcccccggttgtggtcgataatgagcaggcagtttggtcatatata
aaagagaagtatagttctgaatcttggttcacagaaaagttcccatcttcaggcattaca
gtgaaagatttcttgaaattgtcaattacaaatcccttggagaagttgttggatgtaaaa
tgtaatgagaattcgttccgagttcaattaacatacacactttctgatgcactatccgag
aaagagcccattagtgagagcaatggctgctataagaggaggaaaatagatgacactgat
accttgaagaactcttccgacttgcaaaaggttgaaagccatgacctcacttccaaatct
tcaaatgggtgcaaaggtgatcaggcgggtttgtcaaaattcccactagagaaggtcaat
ggaaatgggtgctgctccttggtttttcaatgctataagacttctgtctatgttggtggg
agatatcttaagtactctagaaatgtcagccagtcacgctggattatagatgatgaacga
atgggtgaagcatctgttgaggaaatcgttggtagcaacatcctccccatctgccagggt
gacaagtacaagttccatgctgccgggagagaagacattgatgtgcgcatgctgggtact
gggcgaccttttctggttgagatcctaaatgcacgccaattcccttctgatctgttgata
aaggagattgaaacgaagataaatagcttggaaagcaaacttgtgcaagtgaagaatctt
aggtttttgggtagtcagggttgggaactgatgcgtgaaggagaagcagaaaagcagaaa
cagtatgttgcactggtgtggatttctcgcccctttgaaaatgaagatgagcaaaagtta
tcatcgttcacggatctgaaagttttgcagaaaacaccagtgagagtcctccatcgtcga
agtccactagaacgtgaaaaaatcatacattggatgaaaatagagaagatagctggtagt
tctcaatattttcttttgcacttgtgcactcaggctggaacttacatcaaggaattcgtt
catggagatctcggacgtacatatcccaatgtcggttcgatcctaggatgcagagcagaa
atattgcaacttgatgtcacagatgtgaagatggattgcttccaagcctga
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