KEGG   Salvia hispanica (chia): 125218949
Entry
125218949         CDS       T09851                                 
Name
(RefSeq) F-box protein SKP2A-like isoform X1
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
shis  Salvia hispanica (chia)
Pathway
shis04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125218949
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shis04121]
    125218949
Ubiquitin system [BR:shis04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     125218949
SSDB
Motif
Pfam: LRR_6 LRR_4 LRR_At5g56370 F-box-like F-box LRR_Zer-1 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 125218949
NCBI-ProteinID: XP_047976721
LinkDB
Position
4:51160168..51162658
AA seq 361 aa
MRETEGFNSSFERLMVFGVAESGGVRITEWKDIPVELLLRILSLVDDQSVIVASGVCHGW
RDAISWGLTHLSLSCCKKSMNSLVLSLAPKFTKLQALVLRQDAPQLQDDAVEAIAAHCQE
LQELDLSKSFRLTDRSLYALARGCPELVKLNISGCSAFSDTALGYLTGCCRKLKTLNLCG
CVRTATDRALKAIGFNCHQMQSLNLGWCDRVSDEGVKSLAYGCPNLRALDLCGCLRITDE
SVVALANNCLQLRSLGLYYCQNITDRAMYSLAQSRVRNKRGVWASVKGRYEEEGLTNLNI
SQCTALTPPAVQDLCDSFPALHTCAGRHSLIISGCLNLTSVHCACTLQGHRGPHALPHLA
H
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgagagagacggagggttttaattcgagctttgagagattgatggtatttggcgttgct
gagagtggtggtgtgaggataacagagtggaaggatattccagtggagcttttgctgagg
attttgtcactggtggatgatcaatcggtgattgtggcttctggggtttgtcatggatgg
agggatgcaatttcttggggcctcacccatctctctctctcttgctgcaagaagagcatg
aacagtctggtactatcactcgcccctaagttcacgaagctgcaggctcttgtcttgagg
caggacgcgccacagctccaggacgatgctgttgaagctatcgcagctcactgtcaagag
cttcaagagttggatctcagtaagagcttcagacttactgatcgctccctgtatgcgttg
gcgcgtggctgccctgagctcgtgaagctgaatattagcggctgttcagccttcagcgac
actgctctcggatatctgaccgggtgttgcaggaaactgaagaccttaaatctttgtggt
tgtgttaggaccgcaacagatagggcattgaaggcgatcgggttcaactgccaccaaatg
cagtcgctgaatcttggatggtgcgaccgggtcagtgatgaaggtgtcaaaagtttggcc
tatggttgtcctaatcttcgagctctggacttgtgtggttgccttcgtatcacagacgag
agtgtcgttgcgttggcaaacaactgcctccagctgaggtcgctcgggctgtattactgc
cagaatattacagacagggcgatgtactctctagcacagagccgggtgaggaacaagcgc
ggcgtttgggcgtctgtgaagggcaggtacgaggaggaagggcttacgaacctcaacatc
agccagtgcacggccctcacacccccagccgtacaggatctatgcgactcattccctgca
ctccacacttgcgctggtcgacattcactcataatcagcggttgcctcaacttaacgtcc
gtccactgcgcgtgcaccctccaggggcaccgcggcccacacgctctgcctcatcttgca
cattga

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