Salvia hispanica (chia): 125219028
Help
Entry
125219028 CDS
T09851
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125219028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125219028
03110 Chaperones and folding catalysts [BR:
shis03110
]
125219028
03029 Mitochondrial biogenesis [BR:
shis03029
]
125219028
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shis04147
]
125219028
Enzymes [BR:
shis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
125219028
Messenger RNA biogenesis [BR:
shis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
125219028
Chaperones and folding catalysts [BR:
shis03110
]
Heat shock proteins
HSP60 / Chaperonin
125219028
Mitochondrial biogenesis [BR:
shis03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
125219028
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125219028
Exosomal proteins of other body fluids (saliva and urine)
125219028
Exosomal proteins of breast cancer cells
125219028
Exosomal proteins of colorectal cancer cells
125219028
Exosomal proteins of bladder cancer cells
125219028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
125219028
NCBI-ProteinID:
XP_047976830
LinkDB
All DBs
Position
1:complement(36006750..36010492)
Genome browser
AA seq
604 aa
AA seq
DB search
MAGLSSVGSLAAPGSRVLDDKIAVSSSRLSSLASISASSLGRRKNVALRKSRPSQITAAA
KDLYFNNDGSAIKRLQVGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAREVE
LEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIE
KTTKALVAELQAISKEVEDSELADVAAVSAGNNYEVGNMIAEALSKVGRKGVVTLEEGRS
ADNNLYVVEGMQFDRGYISPYFVTDSEKMTIEYENCKLLLVDKKITNARDLINVLEDAIR
GSYPVLIIAEDIEQEALGTLVVNKLRGALKVAALKAPGFGERKSQYLDDIATLTGGTVIR
EEVGLTLDKAGKEVLGHAAKVVLSKDSTTIVGDGSTQDAINKRVSQIKNLIEAADQDYEK
EKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRL
ASKVDAIKDTLDNVEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYN
AATGQYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPVVAGTPMDNS
GYGY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggctggcctttcctcagtcggttcattggctgctcccggcagcagggttcttgatgat
aagatcgcagtttcatccagcaggttgtcatctcttgcttccatatccgctagttcgctt
gggaggagaaagaatgtggccctccgcaaatcacgcccttctcagataacagctgctgcg
aaggacttgtacttcaacaacgatggctcagccatcaagaggcttcaggttggtgttaac
aaacttgcggatctagttggtgtcacccttggacccaagggaaggaatgtcgtgcttgaa
agcaagtatggtgcaccaaaaattgtcaacgatggagttacagtggctcgagaggttgag
ttggaggatccagttgagaacataggagctaaattggtaagacaagcagctgctaagaca
aacgacctggctggggatgggacaacaacatctgttgttcttgcacaagggcttattacc
gaaggtgtcaaggtagtcgctgctggagcaaaccctgtccttattactaggggaattgaa
aagactaccaaggcattggttgctgaactgcaagcaatatctaaagaggttgaagatagt
gaactagcagatgttgctgctgtaagtgcgggaaacaactatgaagtggggaatatgata
gctgaggccttgagcaaagttggtaggaaaggtgttgttactcttgaagagggacgaagt
gcagacaacaatctttacgttgttgaaggaatgcagtttgaccgtggctacatctctccc
tactttgtaactgacagcgagaaaatgactattgagtatgagaattgcaagttgttgctt
gttgacaagaaaataacaaatgcaagggatctcattaatgtcctggaggatgccattaga
ggcagttatcctgtgttgataattgctgaagatattgagcaagaagctctaggaactctt
gttgtgaacaagctcaggggggcgctcaaagttgccgctcttaaagctccaggatttggg
gagagaaagagtcagtatcttgatgacattgctactttgaccggaggaactgtgatcagg
gaggaagtcgggctaaccttagacaaggctggcaaggaagttttgggtcatgctgccaag
gtggtgttgtctaaggattccactacaatagttggggatggtagcactcaagacgctata
aacaaacgtgtctctcaaattaaaaacctcattgaggcggctgatcaagattacgagaag
gagaagctaaatgagagaatcgcaaagctatcaggaggggttgctgtgattcaggttgga
gcacaaactgaaacagagctgaaagagaagaagcttagagtagaagatgctctcaatgcc
actaaggctgctgttgaggaaggaatcgttgttgggggtggatgcacgctattgaggctt
gcatccaaagtagacgcaatcaaggatactcttgataatgtcgaggaaaaggttggagca
gatattgtgaaaagagctttgagttatccattgaaattgatagccaagaatgctggtgtt
aatggaagtgttgttagtgaaaaggtgttgtcaagtgacaacccaaaatacggatacaat
gctgcgaccggacagtatgaagatctcatggctgcaggaattattgacccgactaaggtg
gtgaggtgttgcttagagcacgcatcttcggtggcaaagacgttcttgatgtcggactgc
gtagtggtggagatcaaggagcctgagccagttgtggcaggaaccccaatggacaactca
gggtatggttactaa
DBGET
integrated database retrieval system
