Salvia hispanica (chia): 125219132
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Entry
125219132 CDS
T09851
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00500
Starch and sucrose metabolism
shis01100
Metabolic pathways
shis01110
Biosynthesis of secondary metabolites
Module
shis_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
125219132
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
shis01003
]
125219132
Enzymes [BR:
shis01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
125219132
Glycosyltransferases [BR:
shis01003
]
Polysaccharide
Storage polysaccharide
125219132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
FAINT
Motif
Other DBs
NCBI-GeneID:
125219132
NCBI-ProteinID:
XP_047976974
LinkDB
All DBs
Position
1:complement(15292998..15304291)
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AA seq
1151 aa
AA seq
DB search
MEVPLPLQRSLSCGIASSQSTHIRIKPFLGISPNGTAQSFGRRAGHMAAKVTYQINASAD
FSRRRPRKSSTPSSKDSTPRGFGPRTQVPTSTQKKDRKNSEAKEGPGTSSQKEIGSLSAD
TPDVKIRSVEEETTNISLVPEVDEDGDGESNGEHDVVGLEVPSAREAFSVSKVSQFEESV
QIPDINKHVIESKDEGISNSEEKLAATGGVDDSYTSISELKRKEDEFLKLKLESEESLRK
ETINKLADANFRKGNKLFYYPELVKPDQHIEIFFNRSFSTLKNEPDVMIMGAFNDWKWKS
FGMNLSKSHLKGDWWSCQLYVPKEAYKIDFVFYNGQDVYENNDEQDFCIVVEGGMDVFDF
ENFLLEEKMREQEDLLRQKAERERQEEEQRYIEAENAAIQADRAQAKEEAAKTRGMMQVL
MKKAPISVDDVWYIEPKPWDVEGSGMVRLYYNRSSGPLSHAKELWIHGGYNNWKDGLSIV
SKLIKSGKDGDWWFADVVVPDRALVLDWVLADGPPHQAVVYDNNNMQDFHAIVPKSIAEE
LYWAEEEQILFRRLQTERRSREEAIRAKAEKTARLKAETKEKTLRTYLLSQKHIVYTDPL
DVRAGSTVNLFYNPANTVLNGKSEVWLRCSFNRWTHRMGPLPPQKMIPAENSSHLKASVK
VPLDAYMIDFVFSEREDGGIFDNKNGMDYHIPVLGGVVKEPPMHIVHISVEMAPIAKVGG
LGDVVTSLSRAVQDMNHNVEIILPKYDCLNLSHVKDLQFHKSYYWGGTEIKVWFGKVEGI
SVYFLEPQNGLFWVGCIYGRGNDGDRFGFFCNAALEFLLQSGSHPDIIHCHDWSSAPVAW
LFKEQYMHYGLSKARIVFTIHNLEFGAELIGKAMAFADKATTVSPTYSREVSGNPVIAPY
LYKFHGILNGIDPDIWDPYNDKFLPVSYTSENVVEGKQAAKEALQERLGLKKADLPMVGI
ITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHTDRARLC
LTYDEPLSHLIYAGSDFILVPSIFEPCGLTQLTAMRYGSVPVVRKTGGLYDTVYDVDHDE
DRAQEQGLQPNGFNFDGADAGGVDYALNRAISAWYDKREWFYALCKCVMEQDWSWNRPAL
DYLELYNAARK
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgccattgcctctgcagaggtctctcagctgcggaattgcgtcgtcgcagagt
acacacatcaggatcaagcccttcctcggaatttcgcctaatggaacggcacaatctttt
gggcggagagctggtcatatggcagccaaggtcacatatcagattaatgcgagtgcggac
ttttcaagaaggcggccaaggaaaagttccacgccaagctctaaggattctacaccaagg
ggttttgggcccagaacacaggtccctacgagtacacagaaaaaggatcgaaagaacagt
gaagcaaaggaaggtccgggtacttcttcacaaaaggagattgggagcttgagtgctgac
actccagatgtgaagattaggtctgttgaggaagagacaaccaacattagtctagttcca
gaagtagatgaggacggtgatggtgaaagtaatggtgaacatgatgttgttggtctagag
gttccatcagcgcgtgaagcattttctgtcagcaaagtaagtcaattcgaagagagtgtc
caaattcctgatattaataagcatgttattgaatccaaagatgaaggaatatccaacagt
gaggaaaaattggcagcaactggaggtgttgatgacagttatacttctatcagtgagctt
aagagaaaggaagatgaatttctaaagctaaagttggaaagtgaagagagtcttcgtaaa
gagacaataaacaagcttgctgatgctaatttcagaaaaggaaacaaattgttttattac
ccagaactggtaaaacctgatcaacatatagagatatttttcaataggagtttctccact
ttgaaaaatgaaccagatgttatgatcatgggagccttcaatgactggaaatggaaatca
tttgggatgaatttgagcaaaagccatctcaaaggtgattggtggtcttgccagttgtat
gttcccaaggaagcatacaaaattgattttgtgttctataatgggcaagatgtctacgaa
aacaatgacgaacaagatttctgcatagttgtggagggtggaatggatgtatttgacttc
gaaaattttttgctagaagaaaaaatgcgcgaacaggaggatttattgagacaaaaagct
gaaagggaaagacaagaagaagaacaaagatatatagaagcagaaaacgcggcaattcaa
gctgatcgagcacaagccaaagaggaagctgcaaagacaagagggatgatgcaagtgttg
atgaagaaggctcccatatcagttgatgatgtctggtacatagagcctaagccttgggat
gtggaaggcagtggtatggtcaggttatattacaacaggagctcaggtccactttctcat
gctaaagagctatggattcatggagggtataataattggaaagatgggctgtccattgtt
tcaaagctcatcaaatccgggaaagatggggactggtggtttgctgatgttgttgtacct
gatagagcccttgtcttggattgggttcttgctgatggtccacctcatcaagcagttgtt
tacgacaacaataacatgcaagattttcatgctattgtccctaaatccattgccgaggaa
ctatattgggctgaggaagagcagatacttttccgaagacttcagactgaaaggcgatcc
agagaagaagcaatacgagctaaggctgaaaaaactgcacgcctgaaagcagaaacaaag
gaaaaaactctgagaacatatttgttgtctcagaagcatatagtctacaccgaccccctt
gatgtccgggctggaagcacggtgaatttgttttataatcccgccaacacagttctgaat
ggaaaatctgaagtctggctcagatgttcattcaatcgctggacgcatcgcatgggcccg
ttgccacctcaaaaaatgattcctgctgaaaatagttcacatcttaaagcatctgtcaag
gttccgttggatgcatatatgatagactttgttttctccgaaagagaagatggtgggatt
tttgacaacaagaatggtatggactatcacatacctgtacttggaggagttgtgaaagag
cccccaatgcacattgtacatatatctgttgaaatggcaccgattgcaaaggtagggggt
cttggtgacgttgtaacaagtctttcacgagcggtccaggatatgaaccacaatgtggaa
atcattctcccaaagtatgactgtctgaatctcagccatgtgaaggatttgcagttccat
aaaagctattattggggtggcactgaaattaaagtttggttcgggaaggtagaaggcatt
tctgtttactttttggaacctcagaatggattattttgggttggctgcatctatggacgt
ggtaatgatggggatagatttggattcttttgcaatgcagctctagagtttcttctgcaa
agtggatcccatccagatataattcattgtcacgattggtctagtgccccagttgcatgg
ttgttcaaagaacagtacatgcattatggcctcagtaaagctcgcattgtttttaccata
cacaaccttgaatttggagctgaattgattgggaaagccatggctttcgcagacaaggct
acaactgtatcaccaacttattcccgggaagtttctgggaatcctgtaattgctccttat
ctctacaagtttcatggtatcctaaatggaattgacccagacatatgggatccatataat
gataagttccttcctgtatcttatacttcagaaaatgttgtcgaaggcaaacaagctgcc
aaagaagctttgcaggaaagacttgggctgaaaaaggctgatctgcccatggtaggaatc
attactcgactgactcaccagaaagggatccacctcatcaaacatgcaatctggcggacc
ctggaacgcaatggacaagtggtcctgctgggttcagctcctgatcctaggattcagaat
gattttgttaatttggcaaatcaactgcattcttcacatacggatcgtgcacgtctatgt
ctgacatatgatgagcctctctcacacttgatatatgctggttctgattttattcttgtc
ccttctatttttgaaccttgtggactaactcaactcacagccatgagatacggctcagtc
cctgttgtgcgcaaaactggaggactctatgatactgtttatgatgttgaccatgatgaa
gatagggcacaagaacaaggccttcaaccaaatggatttaattttgatggagcagatgca
ggaggtgttgattatgctctgaatagagcaatatctgcgtggtacgacaagagggagtgg
ttctatgcattgtgcaagtgtgttatggagcaagattggtcctggaaccggcctgctctt
gattacttggagctctacaatgctgcacgcaagtga
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integrated database retrieval system
