Salvia hispanica (chia): 125219145
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Entry
125219145 CDS
T09851
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125219145
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
125219145
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
125219145
NCBI-ProteinID:
XP_047976988
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Position
4:850084..855980
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AA seq
639 aa
AA seq
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MSNAKLRLHIRERHVVMDNGIIRVTLSKPDGIVTAIKYNHIDNVLETSNDESNRGYWDFV
WSQPGSTGTTGTFDRIQAKKFEVVVESEEQIELSFSRKWDTSLQGKLPPLNIDKRFALLR
GSSGLYSYAVYERLEGWPGFNLDETRIAFKLRKDKFRYMAMADNRQRYMPLPDDRLPGRG
QPLDYPEAVLLVDPIEPQFKGEVDDKYQYSGDNEEVKVHGWISMDDGVGFWQIMPSNEFR
TGGSTKQDLTSHVGPTTLAMFVSAHYGGEDLVVKFGEGEAWKKVFGPVFIYLNSIKPQGE
GEEEDPLSLWKDAKQQALEQIESWPYNFPASEDFPKSAQRGNVSGTLLIKDRYMSDGYVV
GNGAYIGLAPPGEVGSWQTEGKGYQFWSRVDEEGYFSINNIRIGEYSLYAWMPGFIGDFK
HDHNIIITSGCNIDMGKIVYEPTRNGPTLWEIGIPDRTAQQFYVPDPNPKYINKLYVNHP
DRFRQYGLWERYGELYPNSDLVYTIGENNCTTDWFFAHVTRKYQNSYKATTWQIKFKLEA
VEPNGKYYLRLSLASAAQAELQVRINNPDQNPALFTTGLIGKDNAIARHGIHGIYWLFNV
EISANLFIQGINTIYLTQANATGPFQGIMYDYLRLESLK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgcaaaactccggttgcatattcgagaacgccatgtggtgatggataatggc
atcattagagtcacactatcaaaaccagatggcattgtgactgcaatcaaatacaatcac
attgacaatgtgctagaaacatccaatgatgaatccaacagagggtattgggactttgtt
tggagtcaaccaggaagcactggaacaacagggacatttgatagaattcaagcaaaaaaa
tttgaagttgttgtggaatcagaggagcaaatagagttatcattctcaagaaaatgggat
acatcccttcagggaaagctacccccattaaacatagacaaaaggtttgcactgcttcgt
ggctcatcagggctgtattcgtacgcggtgtacgaacggttggaggggtggcccggtttc
aaccttgacgagacaaggatcgcgttcaagctgaggaaagacaagtttaggtatatggca
atggcagacaatcgacagaggtacatgccgttgccggacgacaggctaccgggacgagga
cagccgttggactatcccgaagcggtactacttgtcgacccgatcgagcctcagttcaaa
ggagaggtggacgacaagtatcagtactcgggtgacaacgaagaagtgaaggtccatggg
tggattagcatggatgatggtgtgggtttttggcaaataatgcctagcaatgaattcaga
acaggaggctctacaaagcaagacctcacctctcatgtgggtcccaccactcttgctatg
tttgttagtgcacattatgggggtgaggatttagtggtgaaatttggagaaggagaggca
tggaagaaagtgtttggtccagttttcatttatcttaattctataaaaccacaaggtgaa
ggagaagaagaagaccctctttctctttggaaagatgccaaacaacaggcattggaacaa
attgagagttggccttacaatttcccagcgtcggaggacttcccaaaatcagcgcaaagg
ggtaatgttagcggcacattgctaattaaagacaggtacatgagtgatggttatgtggtg
ggaaatggtgcttacattgggttggctccaccaggagaagttgggtcatggcaaacagaa
ggcaagggttatcaattttggagtagagtagatgaagaaggttattttagcatcaacaac
atcagaattggagagtacagtctgtatgcttggatgccaggattcattggagattttaag
catgatcacaacattatcataacctcaggatgcaacattgatatgggaaaaatagtgtac
gaaccaacgaggaatggaccgaccctatgggaaattggcatcccggatcgaactgctcaa
cagttttacgttcccgaccctaatcccaaatacatcaacaaactttatgttaatcatcct
gataggttcagacaatatggattatgggagaggtatggggaattatatcccaatagcgat
ttagtctatacaattggtgagaataactgcacaacagattggttcttcgcccacgtcacc
agaaaataccagaattcatataaagcaacgacatggcaaatcaagttcaaactcgaagcc
gttgaaccaaatggaaaatactacttgagattgtcacttgcatctgcagctcaagctgaa
ttacaggtacgaataaataatcccgaccaaaatccagcattatttacgactggattaata
gggaaggacaacgcaattgcaagacatggaatccatggcatttattggctatttaatgtg
gaaatatcagccaatttatttattcaaggaattaatactatttatttgacacaagcaaat
gcgactggtccatttcaaggtataatgtatgattacctacgtcttgaaagtctcaaatag
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