Salvia hispanica (chia): 125219177
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Entry
125219177 CDS
T09851
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 2-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125219177
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125219177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Motif
Other DBs
NCBI-GeneID:
125219177
NCBI-ProteinID:
XP_047977038
LinkDB
All DBs
Position
4:25394904..25399619
Genome browser
AA seq
509 aa
AA seq
DB search
MGSTFNPQILVDKLSKLNSSQQSIETLSHWCIFHMNKAKQVVETWDRQFHSAPREQRLAF
LYLANDILQNSRRKGAEFVAEFWKVLPDSLRDVIEHGDEFAKRSALRLISIWDERKVFGS
RGQILKEEFVKKELDNGNKTRKLTGPKLQPVGGNSLEKLVSGFEAVSSSRVDEDAIFTKC
RNAITFVEKVEKDVEGDSQLGHVKGGIGDELKEQHAVLRDCITQLAVVESARGNLVSLLR
EALQEQVYKLDQVRDQLQAAQTRSEQAGNICKQLLGGNGNGQIIVEQSRNAVPVSQMPQK
LIPAAGEQTASVTYTLQAPAPGNSSHIKEEPKSAAAAMAAKLAASSSSAQMLTFMLSSLA
SEGVIRSSINEPPEKKAKLENEHPSYVPQNSPAPAFEQNLPVTSQEMNSNEPPPPPSSPP
PMPPLPPPPMQSFPVPQYMQTAMPMLSCQYTYSPSLQPPLPPPGYTPAAPPATGVSPFTP
PSNGYQNFPPEGGFYGQPSSLPMAPMSRQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcacttttaatcctcagatactggttgacaagctatcaaagcttaacagctca
cagcaaagtattgagactctgtcacactggtgcatttttcacatgaacaaagcaaaacaa
gtcgtagaaacatgggatagacagttccatagtgctcctcgtgagcagcgcctggctttt
ctatatcttgcgaatgacattctccagaacagtagacgaaagggtgcagagtttgttgca
gagttttggaaggttttaccagattctcttcgcgatgtaattgaacatggagatgaattc
gcaaagagatctgctttgcgcctgattagtatatgggacgagagaaaagtatttggctcg
agaggccaaattcttaaggaagagtttgtaaaaaaggaattggacaatggcaataaaact
cggaagcttaccggacctaaactgcagccggttggtggtaattcattggaaaaactagtt
tctggttttgaagctgtctctagcagtcgggtggatgaggatgccatttttaccaaatgt
agaaatgccatcacctttgttgaaaaagtggagaaagatgttgagggtgattctcaatta
gggcatgtcaagggtggtataggtgatgagctcaaggagcagcatgccgttctcagggac
tgcatcacgcaacttgctgttgttgaatctgctagaggaaacctcgtatctctcttacgg
gaggctctgcaggaacaggtctataagctggatcaagtccgagatcaacttcaggcagct
cagactcgttcagagcaggccggtaacatctgcaagcaacttcttggcggcaatggtaat
ggacagattattgtcgagcagagtagaaacgcagtgccagtgtcacagatgccgcagaaa
ttgatacctgcagccggggagcagacagcctcagtgacctacaccctgcaggcgcccgct
cctggaaattcaagccacatcaaagaagaaccgaaatccgcagcagctgcaatggcagca
aagctcgcagcatcgtcgtcttctgcccagatgctgacctttatgctctcgtctcttgcg
tcagaaggagtgatcagaagctccatcaacgagccccccgagaagaaggctaagctcgag
aacgaacacccttcatacgttcctcagaactcccctgctccagcctttgagcaaaatctg
ccggtcacttcccaggagatgaactccaacgagcccccaccaccgccatcgtctccgcct
cccatgccgcctttgccaccaccacctatgcagtcttttccggtgccccaatacatgcaa
accgcgatgccaatgctcagttgccaatacacctacagcccgagcctgcagccgccgcta
cctccacctggttacaccccagccgcccctccggcaactggagtttctccatttactcct
ccgtcgaatggctatcaaaattttccaccggaagggggtttctatggccagccgtcgtct
ctaccgatggccccgatgagccggcagtag
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