Salvia hispanica (chia): 125219600
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Entry
125219600 CDS
T09851
Name
(RefSeq) nuclear pore complex protein NUP98B-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
shis
Salvia hispanica (chia)
Pathway
shis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125219600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125219600
03036 Chromosome and associated proteins [BR:
shis03036
]
125219600
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125219600
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125219600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
125219600
NCBI-ProteinID:
XP_047977577
LinkDB
All DBs
Position
4:16581265..16588101
Genome browser
AA seq
1040 aa
AA seq
DB search
MPHYQNKSHQVLRFEDYKLKKACRGSREAPYSETSGDVINNGHSFEKMISISAMHHYQNK
SHEELRLEDSELQKGFNMSTKPWGVTKTEYRGSREAPYSETPGDAINSGHSIGKMISISA
MPHYQNKSHEELRFQDYELHKGFNISTECRGSREAPYSETPGDGINSGHSPGKFISISAM
PHYQNKSHEELRFQDYELHKGFNISTKPWGVTGTACRGSTEAPYSETPGDGIDKGHSSGK
MISISAMHHYQNKSHEELRFHDYELKKECRRSREAPYSETPGDGIDKGHSSGKFISISAM
PHYQNKSHEELRFQDYELHKGFNISTKPWGVTGIECRGSREAPYSETPGDGINKGHSSGK
IISISGMPCYQNRSHEELRLEDSVLQKGPYISTTPWGVTGTAGRGSREAPYSETPEGDGI
NRWCSPGEIVSISAMPHYQNRSHEELRFEDSELQKGFFHISTKPWAVTGIECRGSGEVPY
SKTPEGDGINTGNSELQKGSSFPLQYPFKESSCLSHPLTSPVPSSQPSFDSLRGTTFGTS
TAAYVKPTVGSTSMGFDPLPFGGSSAVGSVGRDPRTCAFGTSSTNVSSATNNSTLGLLIT
SSTLSDTSNNSVSNNFGFGHGSTSDSASSSIFGSQTSSGSVVTTETKNEESRQGFSATEV
VPRENERDVSKIQSISAMAIYEHKSHEELRSEDYGLCNACYKEPSIIASSFMKSTPVTSS
DPCSSFMNASQPQQTADKVGPISTNDPNTPSQASSGLPIVTEFTSQNINGPHYTPSSNSL
MQSVTSILHGIPTQEPNGRSSETKLQVMFCIDEEANGSVAPSLPRKKPRAWVNITSLSLH
MAQGSKGDEVKDSCSSVQIMEINEDMHALLNLHEVEVAATTERRNADVLALLPKLPDGVE
YYTEPSLRELAAKEMAEAGFCRRVKDFVVGRQGHGSIKFLGETDVCHLDVESIVQLNNRQ
VIIYPNGRKKPRDGGQVNKTAEVTMLNVKCISKKTGKKYVEGPQVESYKEILVKTVRERG
AEFDSYDPVEGELKLRVKLF
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcctcattatcaaaacaaaagtcatcaagtgttgaggtttgaggactataagctaaaa
aaggcatgtcgaggaagtagagaagcaccgtattctgaaacatcaggtgatgtaatcaat
aatggtcactcatttgaaaaaatgatatcaatatcagcaatgcatcattaccaaaacaaa
agtcatgaagagttgaggttagaggactccgagctgcaaaagggattcaacatgtcaaca
aaaccttggggtgttactaaaacagaatatcgaggaagtagagaagcaccgtattctgaa
acaccaggtgatgcaatcaatagtgggcattccattggaaaaatgatatcaatatcagca
atgcctcattaccaaaacaaaagtcacgaagagttgaggtttcaggactatgagctgcac
aaggggttcaacatatcaacagaatgtcgaggaagtagagaagcaccatattctgaaaca
ccaggtgatggaatcaatagtgggcactcccctggaaaattcatatcaatatcagcaatg
cctcattaccaaaacaaaagtcatgaagagttgaggtttcaggactatgagctgcacaag
ggattcaacatatcaacaaaaccttggggtgttactggaacagcatgtcgaggaagtaca
gaagcaccatattctgaaacaccaggtgatggaatcgataaggggcactcctctggaaaa
atgatatcaatatcagcaatgcatcattaccaaaacaaaagtcatgaagagttgaggttt
catgactatgagctaaaaaaggaatgtcgacgaagtagagaagcaccatattctgaaaca
ccaggtgatggaatcgataaggggcactcctctggaaaattcatatcaatatcagcaatg
cctcattaccaaaacaaaagtcatgaagagttaaggtttcaggactatgagctgcacaag
ggattcaacatatcaacaaaaccttggggtgttactggaatagaatgtcgaggaagtaga
gaagcaccgtattctgaaacaccaggtgatggaatcaataaggggcactcctctggaaaa
atcatatcaatatcaggaatgccttgttaccaaaacagaagtcatgaagagttgaggtta
gaggactccgtgctgcaaaaggggccctatatctcaacaacaccttggggtgttacagga
acagcaggtcgaggaagtagagaagcaccgtattctgaaacaccagaaggtgatggaatc
aataggtggtgctcccctggagaaatcgtatcaatatcagcaatgccccattaccaaaac
agaagtcatgaagagttgaggtttgaggactctgaactacaaaaggggttcttccatatc
tctacaaaaccttgggctgttactggaatagaatgtcgaggaagtggagaagtaccgtat
tctaaaacaccagaaggtgatggaatcaacactgggaactctgagctacaaaagggatct
agtttccctttgcagtatccatttaaagaatcaagctgtctctctcatcctctcacttct
cctgtgccatcaagtcagccatcttttgattctcttcggggaacaacctttggtacatca
actgctgcatatgtgaaaccaacagttggcagcacaagcatgggttttgatcctcttcca
tttggcggttcaagcgctgttgggtctgttggtcgagatccaagaacttgtgcttttgga
acatctagcaccaacgtgtccagtgccacaaacaactcgacacttggtcttctcattaca
tcgtcaactttatctgatacttcaaacaattccgtgtcaaataattttgggttcggtcat
ggttcgacttctgattctgcaagcagtagcatatttggaagtcagacttcttctggatct
gttgtcacaactgaaactaaaaatgaagaaagtaggcaaggattttctgcaacagaggta
gttccaagagaaaatgaaagagatgtttcgaaaattcagtccatttctgcaatggcaatc
tacgaacataaaagtcatgaggagttgaggtcagaggattatggactatgtaatgcatgt
tataaagaaccttcgatcatcgcctcatcattcatgaagtctaccccagtaacatcgtca
gatccttgctcttctttcatgaatgcatcacagcctcaacagactgctgacaaagtagga
cccatttcaactaatgacccgaatacaccatctcaagcttcaagtggcctgccaatagtg
accgagtttaccagtcaaaacatcaatggaccacactacactccttcaagcaattcactt
atgcagtccgtgacatcaatacttcatggaatacccactcaggagcctaatggtagaagc
agtgagactaagttgcaggtgatgttttgcattgatgaagaagctaatggttcagtagcc
ccttcgctgccacggaagaaacccagagcttgggtcaatatcacctcactgtctcttcat
atggctcaaggcagcaaaggtgatgaggtcaaagacagttgtagttctgtacaaattatg
gaaataaatgaagacatgcatgcccttctgaatctgcacgaagttgaagtcgctgcaaca
actgaaagacgcaatgctgatgttttagcactactgccaaagcttcctgatggagttgaa
tattacacggaaccttcactgcgcgagctggcagctaaggaaatggcagaagcgggattc
tgcaggcgtgtgaaggactttgttgtgggaaggcagggtcatggaagcatcaagtttctt
ggagaaacagatgtctgccatctcgatgttgaatccatcgtgcagttgaacaatcggcaa
gtgatcatttatccgaacgggagaaagaagccacgagacgggggacaggttaacaagaca
gctgaggtcactatgctcaatgtcaaatgcatcagcaaaaagacaggaaagaaatatgtc
gaagggcctcaagttgagagttacaaagagatcctggtcaaaacggttcgagaacgtgga
gcggagtttgattcatatgatccagttgaaggggaactgaaattgagggttaaactcttt
tag
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integrated database retrieval system
