Salvia hispanica (chia): 125219624
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Entry
125219624 CDS
T09851
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125219624
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
125219624
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_14
AAA_23
AAA_28
AAA_22
RsgA_GTPase
MMR_HSR1
AAA_16
AAA_15
DUF5906
AAA_30
VapE-like_dom
MukB
Motif
Other DBs
NCBI-GeneID:
125219624
NCBI-ProteinID:
XP_047977604
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Position
4:complement(57522611..57525998)
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AA seq
596 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKAAASKAAAPENGSSNVDSLASGVGDLHISDRTCTGV
LCSHPLSRDIRIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLASIGAREL
PIPEHMDIYHLSREIEASDMSSLQAVISCDEERLKLEKEVEILSAQDDGGGEALELIYER
LDALDAATAEKRAAEILFGLGFTKQMQEKKTRDFSGGWRMRIALARALFMNPTILLLDEP
TNHLDLEACVWLEEMLKKFERILVVVSHSQDFLNGVCTNIIHMQSKKIKLYSGNFDQYCQ
TRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKV
ARDKVLVFRFTDVGKLPPPVLQFVEVKFGYTPDNLIYKNVDFGVDLDSRVALVGPNGAGK
STLLKLMTGDLVPQDGMVRRHNHLRIAQFHQHLAEKLDVEMSALQYMMREYPGHEEEKMR
AIVGRFGLTGKAQVMSMKNLSDGQRSRVIFAWLAWRQPHMLLLDEPTNHLDIETIDSLAE
ALNEWDGGLVLVSHDFRLINQVAKEIWVCENQAVTRWEGDIMDFKRHLRARAGLLD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgatgcgagtaaaaagaaggcggctcagaagaaggctgccgccgctgctaaa
agagggggtaaggccgccgcatccaaggcggctgcgccagaaaacggtagcagcaacgtt
gatagtctggccagcggagttggggatcttcacatatctgatcggacgtgtaccggcgtt
ctctgctcccatcctttgtcaagagatattcggatagaatcactttccctgactttccat
ggccatgatcttattgttgactctgaactggaattgaattatggcagacgttatggtttg
cttggtttgaatggttgcggaaaatctactcttcttgcttcgataggtgcccgtgagctt
cctattccagagcacatggatatttatcacctttctagagaaattgaagcttctgatatg
tcctcacttcaggccgtcataagttgtgacgaggagcgcctgaaattggagaaagaagtt
gaaatattgtctgcccaggatgatggtggtggagaggcccttgaactcatttatgaacgg
ttggatgcattggatgcagccactgctgaaaagcgagctgctgagattttatttggtctt
ggctttaccaagcaaatgcaagagaagaagacacgtgacttttctggaggctggaggatg
aggattgctctagcaagagctcttttcatgaacccaacgatattgctgcttgatgaacca
acaaatcatctagatttggaggcatgtgtttggttagaggagatgttgaagaagttcgag
cgaattcttgttgtggtttcacattcccaggatttcctgaacggagtatgcaccaacatc
atacatatgcagagtaagaagataaagctctactctggaaatttcgaccagtattgccaa
accagatctgaacttgaggagaaccagatgaaacaatacaagtgggagcaggagcagata
gcttcaatgaaggaatacattgcacggtttggtcatggatctgctaagcttgcgcgtcag
gcccagagtaaagagaaaactttggcaaagatggagcggggtggtcttacggagaaggtg
gccagggataaggtccttgttttcagatttactgatgttggaaagctccctcctcctgtt
cttcagtttgtggaagtgaaatttggctacactcctgataatctcatctacaagaatgtt
gattttggtgttgaccttgattcgagagtggcactggtgggacctaatggtgctgggaaa
agcaccctgctaaagctgatgacgggggatttggttcctcaggatggcatggttcgtcgc
cataaccacttgaggatcgcacagttccatcagcatttggctgagaaacttgacgtggaa
atgtcagccctccagtatatgatgagggagtatcctggacatgaagaagagaagatgaga
gccatagttggaaggtttggtctcaccggcaaagcacaagtgatgtctatgaagaacttg
tccgatgggcaaaggagccgtgtgatctttgcatggctagcttggaggcaaccgcacatg
ctactgctggatgagccaactaaccatctggatattgagacgatcgactcactggccgag
gcacttaacgaatgggatggtggcttggttcttgttagccacgatttcaggctgataaac
caggtcgcgaaagagatatgggtttgcgagaatcaggccgtgactcggtgggagggagac
atcatggacttcaagcggcacctaagggcgagagctggcttgttggactga
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