Salvia hispanica (chia): 125219665
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Entry
125219665 CDS
T09851
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2-like
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
shis
Salvia hispanica (chia)
Pathway
shis04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125219665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125219665
Membrane trafficking [BR:
shis04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
125219665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
BIG2_C
DCB
Sec7-like_HDS
Mon2_C
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
125219665
NCBI-ProteinID:
XP_047977669
LinkDB
All DBs
Position
1:48129913..48139735
Genome browser
AA seq
1761 aa
AA seq
DB search
MASAGADSRLSKVLLPSLDKIIKNASWRKHSKLAAECKSVVERLTTPNQPPSPSAESKSE
SPRSPHPGVLLDLSLSDSELILSPLINALASDHLKLVEPALDAVQKLIAHGYLHGEADTS
GGDDAKLLSKLIDSACKCHDTGDETVELLVIKALLSAVTSVALRIHGDCLLQVVRTCYDV
YLGSKNVVNQTTAKASLVQMLVIVFRRMEADSSTVPVNPIVVAELTQPMEKADADGSMTV
FVQGFITKIMQDIDGVFSPSTPKSIIGSGAGVHDGAFETKTSTVEGTNPTDLLDSTDKDM
LDAKYWEISMYKTALEGRKGELADGEGDEHLEVQIGNKLRRDAFLVFRALCKLSMKTPPK
DALADPRAMKGKILALELLKILLENAGAIFRTNERFLDAIKQYLCLSLLKNTASTLMIIF
QLSCSIFVSLVSRFRAGLKAEIGVFFPMIILRVLENVAQPNFHQKVTVLRCLEKLCGDSQ
IMIDIFLNYDCDVNASNIFERTVNGLLKTAQGVPPGVVTTLQPPQDVSIKLEAMRCLVGI
LKCMGDWMNKQLRIPDTHIPNKLEAVDNSSDSGSAPLTNGNADESSEASDSHSEASEVSD
VSTIEQRRAYKLELQEGISLFNRSPKKGINFLINAKKVGDSPEEIAEFLKNASGLNKSLI
GDYLGEREDLSLKVMHAYVDSFDFQDVEFDEAIRLFLQGFRLPGEAQKIDRIMEKFAERY
CKCNPKAFISADTAYVLAYSVIMLNTDAHNPMVKVKMSAEDFIRNNRGIDDGKDLPEEQL
RSLFERISRNEIKMKEDKLSTQQPQSVNSNRLLGLDAILNVVIRNRGGDSMGTGDNLIKN
MQEQFKEKASKSESVYYPATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVVIALCLEGF
RSAIHVTAAMSMKTQRDAFVTSLAKFTSLHSPADIRQKNIDAIKAIVTIADEDGNHLQEA
WEHILTCVSRFEHLHLLGEGGPPDATFFAIPENELDKSKSTKSNTLPVLRKKGPGKIQNA
ASPVRRGSYDSAGIAGNVAAGITSEQINNLVSNLNIIEQVGDVNRIFIRSQKLNSEAIID
FVKALCKVSMDELRSTSDPRVFSITKIVEIAHYNMNRIRLVWSKIWHVLSEFFVTIGCSE
NLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQ
MVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEITEKILRDYFSYITETETTTFTD
CVNCLIAFTNSRFNEDISLNAIGFLRFCAAKLAEGDLGKGVSGKVAPTSPKIDNEEAANK
VDHLYLWFPLLAGLSELSFDPRPEIRKSSLQILFDTLRNYGQHFSLALWEKVFESVLFRI
FDDARRAIDPSLARSPSNLTDGNAEELDQNSWLYETCTLALQLVVDLFVNFYDTVNPLLK
KVLSLLVSFIKRPHQSLAGIGIGAFVRLMNNAGELFSEEKWFEVVLSLEEVSRETLPDFS
IVLNEDDKIRDREEDTKDDSHDESTGTIDDAGNSSRQHLYAAISDVKCRAAIQLLLIQAI
SEIYTMYRAQLSVKNTVILFDAIHSVALHAHKTNSDASLRPKLQELGSVTQLQDPPLLRL
ENESYQICLTFLQNLVLDKPPSFEESEVESHLMNLCKEVLQFYIEVACSVKTPDSLLDRK
PLRMIPLSSSRRKELAARAPLIVATLQAMSSIEYYSFEKNLASFFPLLASLISCEHGSNE
VQLALSEMLSSTVGPVLLRSC
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcgggagccgattcccgcctatctaaagtcctactcccatcgctcgacaaa
atcatcaaaaacgcctcatggagaaagcactccaaactcgccgccgagtgcaaatccgtt
gtcgaacgcctcaccacacccaatcaacccccatccccctccgccgaatccaaatccgag
tcgccacggtctccacaccccggagttctcctcgacctctcattatccgattccgagctc
attctcagcccgctgatcaatgcgctcgcgtccgatcacctcaagctcgtggaacccgcg
ctcgacgcggtgcagaaattgatcgctcacggctacctacacggggaggcagacacgagt
ggcggcgacgatgcgaaattgctttcgaaattgatcgactctgcgtgtaaatgtcatgat
acaggggatgagacggtggaattgctggtcatcaaggcgcttctgtctgctgttacgtcg
gtcgcgctgcggatccacggcgactgcttgttgcaggtggtgaggacctgttacgacgtt
tatttaggcagtaagaatgtggtgaatcagacgactgcgaaggcgtctttggttcagatg
ctagttattgtgtttaggagaatggaggctgattcgtcgactgtgccggtgaatccgatt
gtggtggcggagctgacgcagccaatggagaaagctgatgctgatggttcgatgactgtg
tttgtacagggatttattactaagataatgcaggatattgatggtgtttttagtcctagt
acaccgaagagcattataggatcgggggccggggtgcatgatggggcttttgagactaag
acctcgaccgtggaaggcactaatccgacagatttgttggattcaacggataaggatatg
cttgatgccaagtactgggagatcagtatgtataagacggcgttggaggggaggaaaggg
gaattggcagatggtgaaggggatgagcatttggaggtccagattggtaataagttgagg
cgggatgcttttctggtattccgagctttgtgtaagctctctatgaagactccaccaaaa
gatgcgctggcggatcctcgggcaatgaaggggaagattctggctctggagttgctcaag
attttgttggagaatgctggggcaatatttaggacaaacgaaagatttttagatgctata
aagcagtatttatgcttgtcgcttttgaagaacaccgcctcaacccttatgatcattttc
cagctttcatgctcgatatttgtaagtttggtctcaagatttcgagctggactgaaggcc
gaaattggagtatttttccctatgattatcctgagagtattagaaaatgttgcacaacct
aattttcaccaaaaggtaacagtgcttcggtgtcttgagaagctctgtggtgattcacag
atcatgatcgacatattccttaactatgactgtgacgttaacgcttcaaatatttttgag
aggacagtcaatggactacttaaaactgcgcaaggtgttccacctggtgttgtaactaca
ctccagcctccacaagatgtttccattaagctagaagctatgagatgcttggttggtatt
ttgaagtgcatgggtgactggatgaacaaacaattgcggattcccgacactcacattccg
aataaacttgaagctgtggataacagttctgattctggaagtgctcctctgacaaatggc
aatgcagatgaatcatctgaagcatcagatagccactctgaagcaagtgaggtttctgat
gtctcaacaattgagcagcgtcgtgcatataaacttgaacttcaggagggcatctctcta
tttaatcgtagtcccaagaaaggtattaatttcctgataaatgctaagaaggtaggggac
tctccagaagagatagcagaattccttaagaatgcatctggcttgaataaaagtctgatt
ggtgactatttgggtgaaagagaagatttatcactgaaagtgatgcatgcatatgttgat
tcctttgattttcaagatgtggagtttgatgaggcaataagactcttcctacaaggcttt
agacttccaggtgaagcacagaagattgatcgtattatggaaaagtttgctgagcggtac
tgcaaatgtaatccaaaagcctttataagtgccgacacagcttatgtgcttgcctactct
gtcataatgctaaacactgatgcacataaccccatggttaaggtcaagatgtctgctgag
gatttcataaggaacaatcgtggaattgatgatgggaaagatttacctgaggagcaattg
agatcattatttgagcgcatatcaaggaatgagatcaaaatgaaagaagataaactgtcc
acccaacagccacaatctgtgaactcaaacagactgttagggttagatgctatactgaat
gttgtaatccgcaatcgaggtggtgacagcatggggactggtgataaccttattaaaaac
atgcaggagcaattcaaagaaaaggctagcaaatcagagtcagtttattatcctgcaaca
gatgttgtgattctcagatttatgatagaggcatgttgggctcctatgctggctgccttc
agtgttcctcttgaccaaagtgatgatgaagttgtaatagctctatgcttggaaggcttt
cgcagtgcaatccatgttactgcagcaatgtctatgaaaactcaaagagatgcttttgtg
acatcgctagccaaatttacctccctccattcaccagcagatattagacaaaaaaatatt
gatgcaatcaaggcaatagtaacaatagcagatgaggatgggaatcacctacaggaggca
tgggagcatatcttaacatgtgtttcaaggtttgaacacttgcatctgttgggtgaaggt
ggcccccctgatgctactttttttgcaattcctgagaatgaactggacaaatccaaatca
accaaatcaaatactcttcctgttctgcgaaagaaaggacctgggaaaattcagaatgca
gcctcacctgtgaggaggggatcatatgatagtgctggtatagctggtaatgtggctgct
ggaattacatctgaacagattaacaacttggtatctaacttgaacatcatagaacaagtt
ggtgatgtgaaccgcatattcatacggagccaaaagctaaacagtgaggctataattgat
tttgtcaaggctctttgcaaggtatctatggatgaattgcggtccacatctgatccacgt
gttttcagcatcacaaagatagtggagatcgcgcactataacatgaaccgcatcaggctt
gtctggtccaagatttggcatgtgctctctgaattttttgtaaccattggctgttcagaa
aacctttcaattgcaatatttgcaatggactctttgcgccaattatcaatgaaattcttg
gagagggaggagttggcaaactataattttcagaatgagtttatgaagccttttgtaatt
gtgatgcgcaagagtaatgctgttgaaatcagagaattgattatcagatgtgtttctcag
atggtgttgtcccgtgtaaacaatgtgaaatcaggatggaagagcatgttcatggtcttt
acaacagcagcttatgatgatcataaaaacattgtactccttgcctttgaaataactgag
aagattttgcgtgactatttttcttatatcactgaaactgagaccactactttcacagat
tgcgtaaattgccttattgcatttaccaatagtagattcaatgaagacattagtctaaac
gccattggcttcctccgtttctgtgctgcaaaacttgctgaaggagacctaggcaaggga
gtttcaggaaaggttgctccaacttcaccgaagatcgacaatgaggaagctgctaataag
gtggatcatctttatttatggtttcctttgctggcaggcctatctgagctcagctttgat
ccaaggcctgaaatcaggaaaagttccctacaaatactctttgatactctacgcaactat
ggccaacatttttcattggcattatgggaaaaggtgtttgaatctgtcttatttaggatc
ttcgacgatgctcggcgtgctattgatccatcccttgctagatccccaagtaacttgact
gatggcaatgcggaggaacttgatcaaaattcatggctgtatgagacatgcacgttggct
cttcaactggttgttgatctttttgttaacttttatgatactgtcaaccccctattgaag
aaagtattgtcgttattagttagttttatcaaacgtcctcatcaaagccttgctggaatt
ggtattggtgcttttgttcgtttaatgaataatgctggagaactgttttctgaagagaag
tggtttgaggtggttttgtctctcgaagaagtttccagggaaacactccctgacttttct
attgtgctcaacgaagatgataaaatcagggaccgtgaagaagatacaaaggatgatagc
catgatgaatctactgggacaattgatgatgcgggtaactcgagcaggcagcatttatat
gcagctatatctgatgtgaagtgccgagctgccattcagctattattaatacaggctatt
tcggagatttatacaatgtatagagctcaactatcagttaaaaacactgttatcctcttt
gacgccattcattctgtcgcccttcatgcccacaagacaaacagcgacgcctctctacgg
ccaaagctgcaagaacttgggtccgtgacacaactgcaggaccctcccctactccgcctc
gagaatgaatcctatcaaatctgcctcacatttctacagaatcttgttcttgacaagcct
cctagttttgaagagtcagaagtggagtctcacctcatgaacctctgcaaggaggtcttg
caattctacatcgaagtcgcatgctcagtcaagacgcctgactcattgctcgacaggaag
cccttgcggatgatacccttgagttccagcaggcgcaaagaactggctgcacgagcacct
cttatcgttgcaactctgcaggccatgagtagcatagagtattattcgttcgagaagaac
ttggcatccttcttccccctgctcgcgagcctaataagctgtgagcatggatccaacgag
gttcaactggcgcttagtgaaatgctgagctcaacagtgggtccagttttgctccgatca
tgctga
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