Salvia hispanica (chia): 125219817
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Entry
125219817 CDS
T09851
Name
(RefSeq) cyclic nucleotide-gated ion channel 2-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
shis
Salvia hispanica (chia)
Pathway
shis04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125219817
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shis04040
]
125219817
Ion channels [BR:
shis04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125219817
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Motif
Pfam:
cNMP_binding
7TMR-HDED
IQ
Motif
Other DBs
NCBI-GeneID:
125219817
NCBI-ProteinID:
XP_047977848
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Position
4:complement(10695206..10699462)
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AA seq
677 aa
AA seq
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MPLPDIPNPNLSSSPRRFGMDSHNRDGDGSECYACTQVGVPVFHSTSCDRASQPEWEASA
GSSLLPIRDRTGAHKPDLQPARAGRLWSVLDPRSKRVQRWNRAFLLARGLALAVDPLFFY
SLSIGRGGSPCLYLDGGLAAAVTVLRTCVDAVHLCHLWLQFRLAYVSRESLVIGCGKLVW
DARAVARHYLRSLRGFWFDVFVILPVPQAVFWLVVPRLIKENEIREIIRIMLLIFLFQFL
PKVYHSITLMRRMAKVTGYIFGTIWWGFALNLIAYFIASHVAGGCWYVLSIQRVAMCLNQ
RCHDNRSLSCSASHFANATASSSSSSSSSLCLDVDGPFQYGIYKWALPVVSSTSIAVKIL
YPIFWGLMTLSTFGNDLEPTSQWLEVMFSISAVLSGLMLFTLLIGNIQVFLHAVMAKKRK
MQIRCRDMEWWMKRRQLPSQLRKRVRRYERHCWSAVGGDDEMEIIKDLPEGLRRDIKRFL
CLDLIKQVPLFHSLDDLILDNICDRVKPILISKGEKIIREGDPVLRMVFVVRGRVKSSQN
LSRGIVATSLIEAGGFFGDELMSWCLRRPFLDRLPPSSATFTCIESTEAFGLDANNLKYI
TDHFRYKFANERLTRTARYYSSNWRTWAAVHIQLGWRRYLQRTRRTLAYTSANGDSHRRL
RQCAAIFLGIRPHDHLE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgccccttcccgacattccaaaccccaatctctcctcatcaccaaggaggtttggaatg
gattcgcacaacagagacggcgacggtagcgagtgctacgcatgcacgcaggtcggagtt
ccggttttccactcgaccagctgcgaccgcgccagccagcccgagtgggaggcatccgcc
ggttcctccttgcttcccataagggaccggaccggcgcccataaaccggatctccagcct
gcccgggccggccggctgtggagcgtgctggacccgcggagcaagcgcgtgcagcgctgg
aaccgcgcgttccttctggcgcgtgggttggcgctcgccgtcgacccgctcttcttctac
tctctttcgatcggacggggcggctcgccgtgcttgtatctggatggcggcctggcggcg
gcggtcacggtgctgcggacgtgcgtggacgctgtgcacctctgccacctgtggctgcag
ttccgcctcgcttacgtgtccagggaatcactggttattggttgtgggaagctggtgtgg
gacgcacgcgccgtcgcacgtcattatctccggtcgctcaggggcttctggtttgatgta
tttgtgatcctcccagttccccaggcagtgttttggttagtagtgccgagattgataaaa
gagaatgagatacgtgagataatcaggattatgctgctcatcttcctcttccagtttcta
ccaaaagtgtatcatagtatcactttaatgcgaagaatggccaaggtcactggctacatt
ttcggcaccatttggtggggtttcgcccttaatctcatcgcctacttcatcgcttctcac
gtcgctggcggctgttggtacgttctctctatccaacgcgtggccatgtgcctcaaccag
cgttgtcatgacaatcgatccctctcgtgctctgcctctcactttgctaacgccacggca
tcttcttcttcttcttcttcttcttctctgtgtttggatgttgatggacctttccagtat
ggaatttacaaatgggctcttccagttgtttctagcacctccatcgccgtcaaaatactt
tatcctattttctggggattgatgaccttgagcacttttgggaatgacttggagccgacg
agccagtggctggaggtgatgttcagcatcagcgcagttctgagcggtttgatgctcttc
actctgctgattggtaatatccaggtgtttttgcatgctgtgatggcgaagaagaggaag
atgcagataagatgccgcgacatggagtggtggatgaagcggcgccaacttccgtcgcag
ctgaggaaaagggtccgacgctacgagcgccactgttggtcagctgttggaggagacgac
gagatggagatcatcaaggacctgccagaggggctccgccgcgacatcaaacgcttccta
tgccttgacctcatcaaacaggtgccgttgttccacagcttggatgatttgattctcgac
aacatatgcgaccgtgttaagcccattctcatctccaaaggcgagaagattatacgagag
ggagatcccgtgctgcgaatggtgttcgtggttcgtggtcgagtgaagagtagccaaaac
ctaagcagaggaattgtggcgaccagcttaattgaagcggggggtttcttcggggacgag
cttatgtcgtggtgccttcgccgcccgtttttggataggctgccgccgtcgtctgcgacg
tttacttgtatcgagtcaacagaggcgtttggtcttgatgcgaacaaccttaagtatatt
accgatcacttccgatataagttcgcaaatgagaggctgacacgtacggctagatattat
tcctcgaattggaggacttgggctgcggtccacatccagttgggttggcggcgttacttg
caacggacgcgtcgtacgttagcctacacttctgctaacggggacagtcatcgtcgtctc
aggcagtgcgcagcgatctttctaggcatccggcctcatgatcatcttgaatga
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