Salvia hispanica (chia): 125219823
Help
Entry
125219823 CDS
T09851
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125219823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shis03400
]
125219823
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
125219823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
AAA_22
Motif
Other DBs
NCBI-GeneID:
125219823
NCBI-ProteinID:
XP_047977854
LinkDB
All DBs
Position
4:complement(19302341..19310409)
Genome browser
AA seq
921 aa
AA seq
DB search
MEDEDESISNSGDSAGSEPDYDVSPESNGSDCDTEDEQIPPPRSAPPPNLRRKSQNVAAL
VRGNLEVNRQSLFPRVYSVVGSEATIRKPFKPPSSFGYSDNNEQLARRLSARKRFVPWGS
TRPVLVHITNSFSTPKTIENDPEESESLPPEIEPLVLWQPEEAKDQNNESFIIVDALLVK
FLRPHQREGVQFMFDCVSGMLSAENINGCILADDMGLGKTLQSITLLYTLLRQGFDGKPM
VKKAIIVTPTSLVSNWEAEIKKWVGERVKLVALCESTREDVISGIDSFIRSPSPLQVLII
SYETFRMHSSKFNQNGSCDLLICDEAHRLKNDQTLTNRALASLSCKRRILLSGTPMQNDL
EEFYAMVNFTNPGVLGDASYFRRYYEMPIVCSREPTATEEEKRLGSERSTELSAKVNQFI
LRRTNALLSNHLPPKIVEVVCCKMSPLQSQLYSHFIQSKNVKRAISEEAKQAKILAYITA
LKKLCNHPKLIYDTIKGGSPGTSGFDDCLRFFPPSMFSGRSGSWTGGDGAWVELSGKMHV
LSRLLAQLRQKTDDRIVLVSNYTQTLELFAQLCRERRYPFLRLDGSTSISKRQKLVNHFN
DSSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYR
FLSTGTIEEKVYQRQMSKEGLQKVIQQEHVDSEMGNLLSTEDLRDLFTFHENTSSEVHEK
MCCNRCRQEEMMSDSNLAPECTNGGCQIDEEDIGGFAGIAGCSGSLKIHEKQVGIPKEED
LASWGHHHSPSSVPDLILQASAGDEISFVFTNQVEGKLTPIESKERAKIEVVERKGLSVL
KRGLSSQAVLPYKTKEMSPAISFSKDARSSFSLKTLPQPHTKLMRTLEGKTKISLSWKSS
ASFQKPSKVLSPACTSDDDFV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaagacgaatctatctccaattccggagactctgcaggatccgaacccgat
tacgacgtctcccccgaatcaaatggctccgattgtgataccgaagatgaacaaattccg
cctccccgttcggctccgccgccgaacctccggcgaaagtcccaaaacgtagcggccctc
gtgaggggaaacctggaagtgaatcggcagtcgctatttcctcgagtttattctgtggtg
ggttcagaggccaccataagaaagccctttaagcctccctcctcctttggatactctgac
aacaatgagcagttggcacgtcggctttctgctcgcaagcggtttgtgccatgggggtcc
acgaggcctgttctagtccacatcacaaacagttttagtactcccaagaccattgagaac
gatcctgaggaaagtgaatcacttcccccagaaattgaacccttggtgttgtggcagcca
gaagaggccaaggaccaaaacaacgaatcttttataattgtagatgccctgcttgtgaag
tttctcagaccccatcaaagagaaggtgtgcagttcatgtttgattgtgtttcgggtatg
ctcagtgctgaaaacatcaatggatgcattttggctgatgatatggggttgggaaaaacc
ttgcagtcgatcacacttctgtatacccttcttcgtcaaggatttgatgggaaaccaatg
gttaaaaaagcaataattgtgactcctacgagtcttgtgagcaactgggaggctgaaatc
aagaaatgggtcggggaaagagttaagcttgttgctctttgtgagagtacccgggaagac
gttatctctggaattgatagttttattaggtccccaagccctttacaggtattgattatt
tcttatgaaacatttcggatgcattcttcaaaattcaaccaaaatggatcctgtgaccta
ctcatatgcgatgaggctcacaggctaaagaatgaccaaacattgaccaatcgagcacta
gcttctctatcgtgcaaacgccgcattttgctctcaggcactccgatgcaaaatgatctg
gaggagttctatgccatggttaatttcacaaatccaggagtccttggtgatgcttcatat
tttcggcgatattatgagatgccaattgtttgtagtcgagagccaacagctactgaagaa
gaaaagagacttggctcagagcgctctacagaactaagtgcaaaagtaaaccagtttata
ttgcgaaggacaaatgcattactatctaaccacctgccacccaagatagttgaagtagtg
tgctgcaaaatgtcgccactccaatctcagctctacagccattttatccaatcaaaaaat
gtcaaaagagcaatttcagaggaagcaaaacaagcaaagatcttagcatatataactgct
cttaagaagctctgcaatcacccaaagttaatatatgatacaattaagggtggtagccca
ggaacatcaggatttgatgattgtttgcgtttcttcccaccgtcaatgttctctggaaga
tctggttcctggactggtggagatggggcatgggttgagctatcaggaaaaatgcatgta
ttatcccggttactggctcagcttcgtcaaaaaacagatgataggattgttctagtttca
aattacactcagacattggaactttttgctcaattatgtcgtgaaagaagatacccattc
ctacgacttgatgggagtacatcaatcagcaaaagacagaagttggttaatcattttaat
gattcttcaaaggatgaatttgcatttctcttgagtagcaaagctggtggctgtggcctc
aatttaattggtggaaatcgactggttctctttgatcctgattggaatcctgccaatgat
aaacaagctgctgcaagggtctggagggatggccagaagaagagagtctacatctatagg
tttttgagtactggcaccattgaagaaaaggtttaccagcgtcagatgtcaaaagaaggt
cttcaaaaggttattcagcaggagcatgtagattcggagatgggaaatctactttcaacg
gaagatctacgcgacctgttcacatttcatgagaacacaagttcggaagttcatgaaaag
atgtgctgcaaccgctgtagacaagaagaaatgatgtctgatagcaatctcgcacctgag
tgcacgaatgggggctgccaaattgatgaagaggacatagggggatttgcaggcattgcc
gggtgctccggaagtttgaagatccatgaaaaacaggttgggattcccaaggaagaggat
ttagctagctgggggcatcatcattctccatcatctgtacctgatctcatacttcaggct
tctgcaggagatgagatttcatttgtttttacaaatcaagtagagggaaaacttacccct
attgaatcaaaagagagagcaaagatagaggtagtagaacgcaaaggcctctctgtttta
aaaagaggcctctcctcacaagcagtgttgccatataagaccaaagaaatgtctccagca
atctcttttagtaaagatgcaagaagctcattcagtttgaagactttgcctcagccacac
acaaaactaatgcgaactttagaaggtaaaactaaaatctcgctgtcatggaaaagctca
gcgagttttcaaaaaccttcaaaagtgttatctcctgcttgcaccagtgatgatgatttt
gtgtag
DBGET
integrated database retrieval system
