Salvia hispanica (chia): 125219838
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Entry
125219838 CDS
T09851
Name
(RefSeq) transcription factor FAMA isoform X1
KO
K26213
transcription factor FAMA
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125219838
Transcription factors [BR:
shis03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
125219838
BRITE hierarchy
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
MpPF1
Motif
Other DBs
NCBI-GeneID:
125219838
NCBI-ProteinID:
XP_047977870
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Position
4:complement(56144925..56147253)
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AA seq
335 aa
AA seq
DB search
MKMLSYIEPSLWQENFPGLDYEQQQDSINQEMGAIPLLSSSNFCGSNSFDKLSFADVMQF
ADFGPKLGLNQGKAPEEEDGFFLKLQQDDDESHHRISLMASQEREEQGGGEKSTQGEGKS
KRKRPRTSKTVEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPSSYVQRGDQASIIGGA
IEFVRELEQLLQCLESQKRRRLYGDGARPAGDPSTAVQQQQQPQMLAIPSDEETAGLREE
TAESKSFLADVEVKLLGFDALIKILSRRRHGQLIQTIAALEDLQLTILHTNITTIEQTVL
YSFNIKINGEARFTAEDLANSVQQIFSFIHANNGI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgttgtcttacatagagccttctctttggcaggaaaatttccctggacttgac
tatgagcaacaacaagattcaatcaatcaagaaatgggagcaataccacttctatcatca
tccaacttctgcgggtcgaattctttcgacaagctgagcttcgcggatgtgatgcagttt
gccgacttcggccccaaactagggctgaatcaaggcaaggcgcccgaggaagaagacgga
ttcttcctcaagctgcagcaagatgatgacgagagccaccaccgcatctcgttgatggcc
tctcaggagagggaagagcaaggaggtggggaaaagagcactcaaggggaagggaagagc
aagaggaaaaggccaagaacttcgaagaccgtggaagaagttgagagccaaagaatgact
catattgctgtggagaggaatagaaggaagcaaatgaatgagcatcttcgtgtcttgagg
tctctcatgcctagctcctatgttcaaaggggtgatcaagcatctataattggtggagcg
attgagtttgtgagggagctagagcagctcctccaatgcctcgagtcgcagaagaggagg
aggctgtacggagatggggcaaggccagctggagatccatccacggccgtgcagcagcag
cagcagcctcagatgttagccattccaagtgatgaagaaactgcaggtcttcgagaagaa
accgcggagagcaagtcattcttagcagatgtggaggtgaagctgttagggtttgatgct
ttgatcaagattctgtcgaggagaagacatggacagctcatccaaaccattgctgcactt
gaagatttgcagctcactattctgcatactaatatcactactattgaacaaactgttctt
tattctttcaatatcaagattaatggggaggcaaggttcacggctgaagatctggcaaac
tcagttcaacaaattttcagttttatccatgcaaacaatggcatatga
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