Salvia hispanica (chia): 125219866
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Entry
125219866 CDS
T09851
Name
(RefSeq) protein SUPPRESSOR OF PHYA-105 1-like
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
shis
Salvia hispanica (chia)
Pathway
shis04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
125219866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125219866
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
125219866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Pkinase
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_DCAF12
WD40_RFWD3
WD40_like
NBCH_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
125219866
NCBI-ProteinID:
XP_047977907
LinkDB
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Position
4:29169356..29173465
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AA seq
833 aa
AA seq
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MEEKQDDIAANEAIEFSMRDSNIPTNPSNSNSNCPRSSTLTQFDSLNRGETFSTDVTPIL
RRSPCLRNDAGGCSSSNEIINHDHKQGSQSIGWTGQNSRIIDEEFEYRSKDSSKSCSRKE
LKRAFMSLQDVEFSPNKQMNMDSSISSDVIDGPNINNMSSPSFTNLREWLESKAGVDVSK
NDKMLVFKRIVQVVNVLHVQGIALLELRPSSFILLDTGDVEYIGSTTETELWGVQDSSMG
KRWSNYRNVQLEEKWYAFPEGFKTRDLLSLNVYSLGLLLFEFLCYFESIEAHTVAMTDLH
HRILPPSFLSRNHKEAGFCLWLLHPEPSSRPTTREILQSDLLSGLETARSPDNEEASCVE
MVDDVEFDILIHFLVKLKEEKLNKASSLLKTLNFLDSDIKMVERWRSYSAAKDQFESPSS
SVYSMNMLKNKLLGNMKELENTYFSVRSSQLDNEMPHMTRSNSDVLRRRDHLSQGGTRHE
EKHVERIGTFFDGVCKFARYDKFEVCGILRNDDILSSTNKVICSLCFDPEEEYLAVAGVS
KKIKIFEFHSLLNDYVDVQYPLLEMSNKSKFTCICWNNHIRNHLASTDYDGEVQIWDAST
GQRFRQYKEHNKRAWTIDFSHVDAKIFASGSDDCSLKIWSINQRNSTETIWNPANVCCVQ
FSPCSSHLVASGSADYRIYCYDLRHTRIPWCTLAGHDNAVSYVRFLDAETIVSASIDNTL
KLWDLKATTLDGVSPPHASTLTFRGHTNDKNFVGLAVLDGYIACGSETNEVYAYTKSLPM
PMCCHKFGSIDPTLEEESIGHFVTSVCWRKKFEMIAAANSSGIVKILRLANSE
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaacaagatgatattgctgcaaatgaggctatagaatttagtatgagagat
tccaatattcctaccaatcctagtaatagtaatagtaattgccctagaagttcaactctc
acccaatttgatagtttaaacagaggtgaaacattttcaactgatgtcacacctattttg
agaagaagtccctgtctcagaaatgatgctggtggttgctcaagttctaacgaaataata
aaccatgatcacaaacaagggtctcaatcaattggatggacagggcaaaatagtaggata
atagacgaagaatttgaataccgtagtaaagattcatcaaaatcatgctcaaggaaagag
ctaaagagggcatttatgagcttacaagatgtagagttttcaccgaataagcaaatgaat
atggactctagtatatcttctgatgtgatagacggcccaaacattaataatatgtcttct
cctagctttactaacttgagagaatggttagaatctaaggctggtgttgatgtaagcaag
aatgacaaaatgctcgtgttcaagcggatagtgcaagtagtgaatgtgttgcacgttcag
ggcatcgccctgctagaactccgaccatcttcgtttatcttattagacaccggggatgtt
gaatacatcggttccacgacagagactgagctatggggtgtgcaagattcttctatgggg
aagaggtggtcgaattatcggaatgttcagcttgaagagaaatggtatgcttttcctgaa
ggtttcaaaacaagagacttactttcactaaatgtttactctctgggacttctattattt
gagtttttgtgctactttgaatcgattgaagcgcacactgtagctatgacagatttgcat
catcgtatcttgcctccgagttttctttccagaaatcacaaggaagctggattttgtctt
tggctgcttcaccctgaaccttcttctcgccctacaactagggaaatcctgcaatctgat
ttactgtctggacttgaaactgcaagaagtcccgacaatgaggaagcatcatgtgtggaa
atggttgatgatgttgaattcgatatcttgattcattttcttgtcaagctaaaggaagaa
aaactgaacaaggcctccagtttgttgaaaactttgaatttcttagattctgatatcaag
atggtcgagagatggcgaagttattcagctgcgaaggatcagttcgagagcccatctagc
tcagtttacagtatgaatatgctaaaaaacaagttgttgggaaacatgaaggagctagaa
aatacttacttttccgtgagatctagccagctagacaacgaaatgccacatatgacacga
tcaaacagcgatgtcctgagaagacgcgaccacttgtctcaaggtggaactcgacatgaa
gagaaacacgtagagcgtattggaaccttcttcgatggtgtctgcaagtttgctcggtat
gacaaattcgaagtttgtgggattctgagaaacgatgatattcttagctcaacaaataag
gtgatttgctctttgtgtttcgaccctgaagaagagtaccttgctgttgctggggtttcg
aagaagatcaaaatattcgagtttcattcactattgaatgattatgttgatgttcagtat
ccactacttgagatgtcgaataaatcgaagttcacttgcatttgctggaataaccacatc
agaaatcatttggcttcaactgactatgatggtgaggtgcagatatgggatgcgagcacg
ggacaaagattcaggcagtacaaggagcataacaagagagcttggaccattgatttctct
catgtggatgcaaaaatatttgctagtggcagtgatgattgttctcttaaaatatggagc
atcaaccagagaaactccacggaaactatctggaatcctgcaaacgtttgctgtgttcaa
ttttctccgtgttcgtcccatcttgtagcttctggatccgcagattatagaatctattgt
tacgatcttcgacatacaagaatcccatggtgcacattagctggtcacgacaatgcagtt
agctatgtaaggtttctagatgcggagacgatagtgtcggcttccatagacaacacattg
aagctatgggatctcaaggcaacaaccttagatggtgtgtctccccctcatgcttccact
ttgacatttagaggccatactaatgataagaactttgttgggcttgcagtgttggatgga
tacatagcatgtggttctgaaacaaatgaggtatatgcttataccaaatctctacccatg
cccatgtgttgccacaaatttggaagcattgacccaacattagaagaagagagtattggt
cattttgtaacaagtgtgtgttggaggaaaaaatttgaaatgattgctgctgctaactcg
agcggaatagtaaagatactacgactcgcaaattcggaatga
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