Salvia hispanica (chia): 125219999
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Entry
125219999 CDS
T09851
Name
(RefSeq) transcription factor GAMYB-like isoform X1
KO
K09422
transcription factor MYB, plant
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125219999
Transcription factors [BR:
shis03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
125219999
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
125219999
NCBI-ProteinID:
XP_047978056
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Position
4:complement(49677142..49681592)
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AA seq
562 aa
AA seq
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MCVYEFLCMQLQSISIEPFPGNTNEKKSSLGFYDIRHWIFIWKDLICRGRWIQETTMSCE
SDERNSNSGTDPPPVDDGIEGNVGGNGPLKKGPWTTAEDAILIEYVTKHGEGNWNAVQKH
SGLARCGKSCRLRWANHLRPDLKKGSFTAEEESLIIKLHANMGNKWARMATELPGRTDNE
IKNYWNTRIKRRQRAGLPPDICVKSLNDNLQSDDTSNLSSGNLHHPELKSIHIPRVEFKN
FDAQGLLDFPANNWLDISASSLLTQGPNSPYDNKSLLPAVHPSKRFRWSEPVFNGLNAPT
CNVFPGGNQYHIDNSTQIGKSSVFSAYDHNPVTYHARASSLPNGSHAVSNGHSSSEPSRA
MKQELPSLQTQMGTWASPSPSSPLPSVDTLHQTPPNEQNSGLLEAVINESDAIRNSKSNS
ALHTPHDSTIMDDSEYTLHELEWEAYEEQNSSLGHSSSSVFSENSFDEPFSMGFPVNEEA
MNGARMPYANNVETRNQMIFSRRDFSVASNCLGAVEHKLKDAAIFLGGDLSRESKAVDAV
ETSSTPGYIDHDFGTWNIVPNI
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtttatgagtttctttgcatgcagctgcaatcaatctcaattgagcctttccca
ggaaacacaaatgaaaaaaaatcgagtcttggattctacgatataagacactggattttc
atctggaaagatttaatttgcagaggtcgctggatccaggagacgacaatgtcgtgtgaa
agtgacgagaggaattccaacagtggcacagatcccccgcctgttgacgatggtattgaa
gggaatgtcggtgggaatggcccacttaaaaaaggtccttggactactgcagaagatgca
atcttaattgaatatgttacaaaacatggagagggaaactggaatgcagttcagaaacac
tcaggtcttgcccgctgtggaaagagttgtcgtttgaggtgggcgaatcacctcagacca
gatcttaagaaaggttcatttacagccgaggaggagagtctcataattaaactccatgcc
aatatgggaaacaaatgggctcgaatggctactgagttgcctggccgcacagacaatgag
attaagaattactggaacaccagaatcaaaagaagacaacgtgctggcctaccacctgat
atctgtgtgaagtcgttgaacgataacctgcaaagtgacgatacgagtaatttatcatct
ggtaatctgcatcatccagaactcaagtcaattcacattccacgagtggaatttaagaat
tttgacgcacagggccttcttgattttcctgctaataactggcttgatatttccgcaagt
agcctgcttactcagggtccaaactctccatacgataacaagtccttgctcccagcagtt
catccatccaagcgttttcgatggtccgaaccagtgttcaatggcttaaatgctcctacc
tgtaatgttttccctggtgggaatcagtaccatattgataattctacacaaattggtaaa
tcttcggtgttctctgcatatgatcataatcctgtaacttaccatgcaagagcttcgagt
ttacctaacggcagccatgccgtctcaaatggccactcttcttcagagccttctcgggca
atgaagcaggagctcccttcactccaaactcagatgggtacttgggcctcaccctcaccc
tcttctcctttgccttccgttgataccttacaccaaacgcctccaaatgagcagaatagc
ggtctattagaagcagtaatcaatgaatcagacgctataagaaactccaagagcaacagt
gctctgcacactccacatgattccactattatggatgactcagaatatactctccacgag
ttggaatgggaagcatatgaagaacaaaactcttctttaggtcattcttcctcatcggtg
ttcagtgaaaactcgttcgatgagcccttttccatgggttttccagttaacgaagaagca
atgaacggggctcgaatgccatatgctaataatgttgagacaagaaaccagatgattttt
tccagacgggatttctcagttgcctcaaactgcttgggcgcagtggaacacaagctaaaa
gatgcagcaatatttcttggtggcgatttgagcagagaaagcaaagcagtcgatgcagtg
gaaacttcatctactccaggctacattgatcatgatttcggtacttggaacattgtgcct
aacatctag
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