Salvia hispanica (chia): 125220019
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Entry
125220019 CDS
T09851
Name
(RefSeq) calcium-binding protein CAST-like
KO
K13448
calcium-binding protein CML
Organism
shis
Salvia hispanica (chia)
Pathway
shis04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125220019
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Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_FSTL1
EF-hand_9
EF_EFCAB10_C
AIF-1
EF-hand_14
EH
SAPC2_N
SPARC_Ca_bdg
Dockerin_1
Motif
Other DBs
NCBI-GeneID:
125220019
NCBI-ProteinID:
XP_047978086
LinkDB
All DBs
Position
4:complement(40291002..40291921)
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AA seq
184 aa
AA seq
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MENEGQCKAGEGGRSFRLRSPSLNSVRLRRIFDIFDKNNDSVITVDELGQALALLGLQTD
QAQLDSMVQSYVQPGNTGLSFDDFQALHRSLDDAFFGLADEPAEVDDKQEEYDLTEAFKV
FDEDGDGYISARELQVVLSKLGLQEGTELDRVEMMISSVDKNHDGRVDFLEFKDMMRSVI
VPSS
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgaggggcagtgcaaggcaggcgagggcgggcgatccttccggctccgcagc
ccgagcctgaactcggtgcggctgcggcgcatcttcgacatcttcgacaagaacaacgac
agcgtcatcaccgtggacgagctgggccaggccctggccctcctgggcctccagacggac
caggcccagctcgactccatggtgcagagctatgtccagcctggcaacacgggcctctcc
ttcgacgacttccaggccctccaccgctccctcgacgacgccttcttcggcctggccgac
gagcccgccgaggtggacgacaagcaggaggagtacgacctcaccgaggccttcaaggtc
ttcgatgaggacggggatggctacatctccgctagggagctgcaggtcgtgctcagcaag
ctcggcctgcaggagggcaccgagctcgatcgggtcgagatgatgatctcctccgtcgat
aagaatcacgacggccgggttgatttcttagagtttaaggatatgatgcgcagcgtcatt
gtcccttcatcctag
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