Salvia hispanica (chia): 125220087
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Entry
125220087 CDS
T09851
Name
(RefSeq) elongation factor Tu, mitochondrial-like
KO
K02358
elongation factor Tu
Organism
shis
Salvia hispanica (chia)
Pathway
shis04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125220087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
shis03012
]
125220087
03029 Mitochondrial biogenesis [BR:
shis03029
]
125220087
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shis04147
]
125220087
Translation factors [BR:
shis03012
]
Eukaryotic type
Elongation factors
125220087
Prokaryotic type
125220087
Mitochondrial biogenesis [BR:
shis03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
125220087
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125220087
Exosomal proteins of breast cancer cells
125220087
Exosomal proteins of colorectal cancer cells
125220087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Ribosomal_S8
GTP-eEF1A_C
EF-G_D2
Bacteriocin_IId
Syncollin
Motif
Other DBs
NCBI-GeneID:
125220087
NCBI-ProteinID:
XP_047978180
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Position
4:25965207..25969681
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AA seq
444 aa
AA seq
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MASVALRNTTSKRLFTLSPQLYSSCCRGSVAAPLSVSDSPIMPNPWWRSMATFTRTKPHV
NVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYETV
KRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGVPSLVC
FLNKVDAVDDPELLELVEMELRELLSFYKFPGDDIPIVRGSALSALEGKNEEIGKQAILK
LMDAVDAYIPDPVRQLEKSFLMPVEDVFTIQGRGTVATGRVEQGIIKPGEEVEILGLSQN
KLKTTVTGVEMFKKTLDNGQAGDNVGLLLRGLKRDDVQRGMVIAKPNTIKTYTRFEAEIY
VLTKEEGGRHTAFFSNYKPQFYLRTADVTGKVELPENVKMVMPGDNVTAVFELIYPVPLE
AGQRFALREGGRTVGAGVVSKVMS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgtggcgctcaggaacaccacctcgaagcggctgttcacgctctccccccaa
ttatactcatcatgctgccgaggatccgtcgccgcgccgctctccgtttccgattcgccg
ataatgcccaatccgtggtggagatccatggccacatttacccggacaaaaccacatgtc
aatgtgggaaccattgggcatgttgaccatgggaagaccaccttgactgcggctattacc
aaggtcttagcagaagaagggaaggcaaaggctattgcttttgatgaaattgataaagcc
cctgaagagaagaagagagggattacaattgctacggctcatgtcgagtatgagactgtg
aagaggcattatgctcatgtagattgtccaggtcacgctgactatgttaagaatatgatt
actggagctgcacaaatggatggaggtattcttgttgtatccgcacctgatggaccaatg
ccacaaactaaggaacatattctgcttgctcgccaggttggtgtgccatcacttgtatgt
ttcctgaataaggttgatgctgttgatgacccagaactgctggaacttgtggaaatggag
ctacgtgaattgcttagcttttacaagtttcccggggatgacattcctattgtccgagga
tcagccttgtctgcgttggagggtaaaaatgaagaaatagggaaacaggcaattttaaag
ttaatggatgctgtagacgcctatattcccgatcctgtacgccaacttgagaaatctttc
ttgatgcctgttgaagatgtttttaccattcaggggcgtggaactgtggcaactggccgt
gtggaacagggtatcatcaaacctggggaggaagtggaaattttagggctgtcgcagaat
aaacttaaaactacagtaactggtgtagagatgttcaaaaagacgcttgataatggccag
gctggagacaatgtgggtctgcttctacgtggcttgaaacgtgatgatgtccaaagaggg
atggtgattgcaaaaccaaataccattaagacatacacaagatttgaggcagaaatatat
gtcctcacgaaggaggaagggggtcgccatactgctttcttctcgaattacaaacctcaa
ttctacttgagaacagctgatgtcactggtaaagtcgagttgcccgaaaatgtgaagatg
gttatgcccggggacaatgtaactgctgtctttgagctcatctacccagttcctctcgaa
gcaggacaaagattcgccctgagggaaggtggccggactgtaggggcaggagttgtttca
aaggttatgagttga
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