Salvia hispanica (chia): 125220223
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Entry
125220223 CDS
T09851
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2-like
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125220223
03036 Chromosome and associated proteins [BR:
shis03036
]
125220223
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125220223
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125220223
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
125220223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-RING_5
PHD
RING_XB3-XBAT31
Prok-RING_4
Prok-RING_1
PHDvar_NSD
EMC3_TMCO1
AT_hook
TRAF3_RING
Tox-PL-2
Motif
Other DBs
NCBI-GeneID:
125220223
NCBI-ProteinID:
XP_047978344
LinkDB
All DBs
Position
4:5058646..5092682
Genome browser
AA seq
721 aa
AA seq
DB search
MSSNQVAQVSQLPCDGDGVCMVCKQKPAEEEILSCKTCVTPWHVACLTSARPQTLADTPH
WECPDCSDLSSCAAPAVSGGSLVEKIRAIEADASLTDLEKARRRQELLGGPKEGEETEAK
GAGGVSGILGDQFNCSICMQLLDRPVSTPCGHNFCLKCFQKWTGQQRMKTCAICRKMIPV
KMAKEPRINSAIVMAIRTAKASQSNCSGGPAKVSHFIHNQDRPDKAFTTERAKKTGKANA
CSGKIFVTIPSDFLGPITPEYDPTRGLGVTVGETWEDRMECRQWGAHFPHVAGIGGQSNH
GAQSVALSGGYEDDEDHGEWFLYTGSGGRDLTGNKRTNKKQSFDQSFKSSNEALRVSCRE
GYPVRVVRSHKEKRSSYAPETGVRYDGIYRVEKCWRKAGQQGFVVCRYLFVRCDNDPAPW
TIDTQGDRPRPLPSIPELNQAKDITERKKSPAWDFDEQKGIWTWTRPQPPSQKTLVDGDK
VKITKRKNQSGTGSVKAKLLKEFGCLICRKVMVQPLTTPCAHNFCKACLEGAFSGQSHIK
ERKTGGRTLRAQKNVMKCPSCTQDISEFLQNPQINRELMSVIETLQKQLEEESSKAKENE
DAQSLNSSENAEEEGSEVEVREDAVSVSKRRKLSNDGAQAGEPEGTKDDEVAEPGRLADG
DESTQVNVHECADETPDAVAESTKEEKAEKPDVGATEGLEPAKRGRGRPKKASVQNSSGA
N
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaaccaagtcgcgcaggtcagccagctcccgtgcgacggcgacggcgtgtgc
atggtctgcaagcagaagccggcggaggaggagatcctctcgtgcaagacgtgcgtgacg
ccgtggcacgtggcgtgcctcacatccgcccgaccacaaaccctagccgacacgccccac
tgggagtgccccgactgctccgatctctcatcctgcgccgcgccggccgtctccggaggc
agcctggtggagaagatccgcgcgatcgaagccgatgcgtcgctcacggacctggagaag
gcgaggcggcgccaggagctgctcggagggccgaaagaaggtgaggagacggaggcgaag
ggcgctgggggtgtttcggggattttaggggaccagttcaactgctccatttgcatgcag
cttttagatcgacctgtttcgacgccgtgtggtcacaacttctgcttgaaatgcttccaa
aaatggacagggcaacaacgcatgaagacctgtgctatttgtcggaagatgattccagtc
aagatggctaaggagcctcgaataaactctgccattgtcatggcaatccgaacagctaaa
gcttcccagtcgaactgctcgggaggccctgcaaaggtatcccacttcatccacaaccaa
gatcgccccgacaaagcatttacaacagagcgtgcgaaaaaaaccggaaaggctaacgca
tgcagtgggaagatatttgtgaccattccctcagattttcttggtccaatcacaccagag
tacgacccgacaaggggcttaggtgtgacagttggagaaacttgggaagacaggatggaa
tgcaggcaatggggcgctcacttccctcatgttgcaggtattgggggtcaatctaatcat
ggggcccagtcggttgcactgtcaggtggttatgaggacgacgaggatcacggagaatgg
tttctctacacggggagtggtggacgcgaccttactgggaataaaaggacgaacaagaaa
cagtcctttgaccagagcttcaaaagttccaatgaggctctaagggttagttgtcgcgag
ggctatcctgtacgggttgtgaggtcccacaaagaaaagcgatcttcttacgcaccagag
acgggtgtgcgttatgacgggatttacagggtagagaagtgctggcgcaaggctgggcaa
caaggatttgtcgtctgtcgttatctgtttgtgcgttgtgataatgatccagcaccatgg
accattgacacccaaggagatcgtccgaggcctctaccttcaattcccgagctgaaccaa
gctaaggatattaccgaaaggaaaaagagtcctgcctgggatttcgatgagcagaagggc
atctggacatggacgagacctcaaccgcccagtcaaaaaacgctcgtagacggtgataaa
gtaaagatcaccaagaggaaaaaccaaagcgggactggatcagttaaagcaaagcttctg
aaagaatttggctgcctcatctgtcggaaagtgatggttcagccactcactactccctgc
gcgcataacttctgcaaggcgtgcttagagggcgccttttccggtcaatctcacatcaaa
gagagaaaaactggagggaggacgcttcgtgcacagaaaaatgttatgaagtgcccatct
tgcacacaagatatttctgagttccttcaaaatcctcagatcaacagagagttgatgagc
gtgattgaaacgctgcagaagcagttggaggaggagagctccaaggctaaggaaaacgag
gatgcccaaagcttgaattcaagcgagaatgctgaagaagagggctcagaagtggaagtg
cgagaagatgcagttagcgtttctaagcgaaggaagcttagcaacgatggtgcccaagcc
ggagagccagaagggacaaaagacgatgaggtagcagaaccaggcaggcttgctgatgga
gacgagagcacacaagtaaatgtgcacgagtgtgctgatgaaacaccagatgcagttgct
gaaagcacaaaagaggaaaaggctgagaaacctgatgtgggagccacagaaggcctcgaa
ccagcaaagcgtgggcgtggtaggcctaagaaagcctctgtgcagaacagttctggggcg
aattga
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