Salvia hispanica (chia): 125220231
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Entry
125220231 CDS
T09851
Name
(RefSeq) SNW/SKI-interacting protein A-like
KO
K06063
SNW domain-containing protein 1
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125220231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125220231
Spliceosome [BR:
shis03041
]
Complex B
Other components
Prp19-related factors
125220231
Complex C
125220231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
125220231
NCBI-ProteinID:
XP_047978350
LinkDB
All DBs
Position
4:complement(5204465..5206156)
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AA seq
482 aa
AA seq
DB search
MVEFNNSANSVPPYMKRAGFKPSKPVDFGDGGAFPEIHYAQYLFGIGRIDYANSLSQDEN
AKKIVYSQHSDLVPVFAKDVAKEDGMDLDEKQREIDETTQQTNAALEQIVNVRLNAAESK
FIRYKPSQQSACANGRIIRVLGMAVDPLAPPKFKHKRIPRGSGSPPVPVMHSPPRPVTVK
DQQEWKIPPCISNWKNSKGYVIPLDKRMAADGSGLQEVRISDNHAKLSEALYVGEQKARE
AVAARSKVQKEMVMKEKEKKVMELRMLAQKARIKKSGVASADDGDMIVVCERDRDGPKET
EDKKEERLTRQRERVRERRLEAKDGGARKKGKISRDRDRDITEKVALGMANTGAKGGEVM
YDQRLFNQEKGMDSGFGSGTDDAYNIYDKGLFTAQSALTTLFKPKKDRDDEMYGGADEQL
DKIICIKVDRAFTGTSERSGPRDGPVEFDKEQDPFGLDEFLKEVRMKESGGSKRDGSDKD
LP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggtggagttcaataattcggctaattcagtgcctccttatatgaaacgggcagggttt
aagccgtcgaagcctgtggattttggggatggaggggcttttcctgagattcactacgcg
cagtatctatttgggattgggaggattgattatgcaaattcgttgagtcaggatgagaat
gcgaagaagattgtgtattctcagcactcggatcttgttccagtctttgccaaggatgtt
gcgaaagaggatggcatggatcttgatgagaagcagagggagattgatgagacaacacag
caaaccaatgctgcattagagcagattgtgaatgttaggttgaatgctgcggaatctaag
ttcatcaggtataagccgtctcagcagtcggcttgtgctaatgggagaatcattcgcgtg
ttgggaatggcggtagatcctttggcgcctcccaagttcaagcacaagagaattccgaga
ggttcgggttctccaccagtccccgtcatgcattccccccctcggcccgtgactgtgaag
gaccaacaggagtggaaaatcccaccttgcatatctaactggaagaattctaaaggttat
gtgattcctctcgacaaacggatggctgctgatggcagtgggctgcaggaggttcggatt
agtgataatcatgctaagttatccgaggctctgtatgttggagaacagaaagctagagag
gctgttgcagcgcgttcaaaggttcaaaaggagatggtgatgaaggaaaaggagaagaaa
gttatggaactacggatgttggcacagaaggctagaattaagaaaagtggagtagcttct
gctgatgatggtgatatgattgtggtgtgtgaaagggatagagatggccccaaggaaaca
gaagataagaaagaggaaagattgacacggcaaagagagagagtgagggaaagaagactg
gaggcgaaagatggtggcgcgaggaagaaggggaagataagccgggatagagaccgtgat
atcactgagaaagtggctcttgggatggccaacactggtgcaaaagggggtgaagttatg
tatgatcagaggctcttcaaccaggagaaagggatggattcgggttttggttctggcacg
gatgacgcctacaacatctacgacaagggcctgtttactgctcaatctgctttgactact
ctgttcaagcctaagaaagaccgcgatgatgagatgtatggtggtgctgatgaacagctt
gataagataatatgcatcaaggttgacagggcgttcactggtacatccgagcggtctggc
cctagagacgggcctgttgagtttgacaaggaacaagatccttttggtcttgacgaattc
ttgaaggaggtcaggatgaaggagagtggcggatccaagcgagatggctcagacaaagat
ctaccctga
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