Salvia hispanica (chia): 125220341
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Entry
125220341 CDS
T09851
Name
(RefSeq) amino acid transporter AVT1I-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
shis
Salvia hispanica (chia)
Pathway
shis04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
125220341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shis02000
]
125220341
Transporters [BR:
shis02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
125220341
SSDB
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Paralog
GFIT
Motif
Pfam:
Aa_trans
DUF8024
Motif
Other DBs
NCBI-GeneID:
125220341
NCBI-ProteinID:
XP_047978460
LinkDB
All DBs
Position
4:10573554..10575134
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AA seq
424 aa
AA seq
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MQEAKQPTEVSLNIPLLVDYYTDTNQYCHLPKGEEIDPIIPRTTSFFKTTFNGLNSLSGV
GILSIPFALSLGGWLSLILLLIIASATFYTGLLIKRCMDADDKIRSYPDVGERAFGGKGR
AVVSMFMNVELFMVATGFLILAGDNLSTLLPDVELHLCGAVIGGRAALVLAVAAMIAPTI
WIDNMRSLAYVSATGVAASVVILGSVLWSGITEGIGFSQKGELLNWGGLPTALSLYAFCY
CAHPVFPTLYTSITDRSQFSSVLLVCFSLCTVTYTSMAVLGYTMFGSELQSQITLNLPTD
RLSSKVAIFTALLNPIAKYALMMKPIVDSVEGGRVCRSLTRVALISGSVFVAVTVPFFGY
LMSLVGAFLSVTASILLPCFCYLKICGKSKLGWELVVIAFIVALGLLVFVVGTYTSLLQI
VDNV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaagccaaacaaccaactgaggtttctctaaacatacctttgttggtggattac
tacacagacacaaaccaatactgccatctcccaaaaggagaagaaatcgatcccattatt
ccaagaacaacctccttcttcaagacaactttcaacggattgaactctctctcaggagtt
ggaattttgtcgattccattcgccctatccttgggcggatggttgagcctgatcctgctg
ctgatcatagcgtcagcgacgttctacaccggattgctgatcaaacggtgcatggacgcc
gacgacaagatcagaagctacccggatgtcggggagagggctttcggaggtaaagggaga
gcagtggtctctatgttcatgaacgtggagctcttcatggtggccactggcttcctcatc
ctcgccggagacaatctgtccaccttgcttccggacgtggagctgcacttgtgcggcgcc
gttatcggtgggagagcggctctggtgctggcggtggcggccatgatagcgccgactatt
tggatagacaacatgaggagccttgcctatgtttcggccacgggagttgcagcttcggtt
gtgatactcgggtccgtcttgtggtccgggataaccgaaggcatcggattctcgcagaag
ggagagcttttgaattggggcggcttgcctactgctttaagcttgtacgcgttctgctac
tgtgcgcatcctgttttccccactctgtatacttctattacagataggagccagttttca
tcggttctactggtgtgtttctcgttgtgcacggtgacctacacatcgatggcggtgtta
gggtacacaatgttcgggtcggagctgcaatcgcagatcacgttgaaccttccgacagat
agattaagctcgaaagtggcgatcttcactgcgctgctcaaccccatagccaaatacgcg
ctgatgatgaagcctattgttgattcggttgagggaggaagggtttgccggtcgttgacg
cgagttgcgttgatcagcggcagcgtgtttgtggcagtgacggtgccgtttttcggatac
ctaatgtcgctggtgggggcgtttttgagcgtcaccgcttctatactgctcccatgtttt
tgctacttgaagatatgtgggaaatccaagttgggttgggaattggtagtcatagcattt
atagtggcgttggggctcctagtgtttgttgtaggcacttacacatctttgcttcaaatt
gtggacaatgtttag
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