Salvia hispanica (chia): 125220459
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Entry
125220459 CDS
T09851
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
shis
Salvia hispanica (chia)
Pathway
shis04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125220459
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shis04040
]
125220459
Ion channels [BR:
shis04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125220459
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Motif
Pfam:
Ion_trans
cNMP_binding
Endotoxin_N
Motif
Other DBs
NCBI-GeneID:
125220459
NCBI-ProteinID:
XP_047978586
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All DBs
Position
4:complement(15993015..15995528)
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AA seq
668 aa
AA seq
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MNNLRVVPIPAGSSILHEHQQQQEWWRQVLDPGGEIVNRWNRIFFAICMIALYIDPLFFY
LIRLEPHHNCLSMEYALAGFLVPTRTLVDLFSSIHILLKFRTAYIAPNSTVFGRGDLVTD
TNLIAARYLKRNFAIDLAAALPLPQCVVWGIMPMTVARSSNHVNHTISLLIILQYIPRLI
IIFPLNWRIIKNTGVVAKTAWTGAAYNLILYLLASHALGAIWYLMSVERIYSCWRDYCAL
EGRSVCNTSYFDCLSTLPGHDAWHNSTLVFQRCDGQTGVYNFGMFEIALYDHIASVNFFE
KYFYCLWFGLKSLSSYGQSMEASAKVTETIFGILVCIMGLLFFSLLIGNVQTYLQSTTAR
LEEWRVKRRDTEEWMRHRQLPPNLQERVRRFVQYNWLSTRGVKEEEILHELPLDIRREVQ
KHLCLDLVRRVPFFSKMDNQLLDAICQRLVSSLNTKGTFIVREGDPVNEMLFIIRGQLES
STTDGGRSGFFNSITLKVGDFCGEELLNWALMATSHLNLPASTRTVKCITEVEAFALRAD
DLKFFAAQFKRLHSKRLQHSFRYYSHQWRTWGACILQAAWRRFRRRKLADELSRQESMMS
LQDVDYGDDDDDDDPSRRGSSALTAALLAKRFAKKAKRGTSTLRKLKILAGESTSPIPKL
FKPDEPSF
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatctccgggtggtcccaatcccggcgggcagctcgatcctccacgagcaccag
cagcagcaagaatggtggcgtcaggtcctggatcccggcggcgaaatcgtgaaccgatgg
aaccgcatcttcttcgccatctgcatgatcgccctctacatcgatcccctcttcttctac
ctgatccgcctcgagccccaccacaactgcctcagcatggaatacgccctcgccggcttc
ctcgtccccacccgcaccctcgtcgacctcttctcctccatccacatcctcctcaagttc
cgcaccgcctacatcgcccccaactccaccgtcttcggccgcggcgacctcgtcactgac
accaacctcatcgccgcccgctacctcaaacgcaacttcgccatcgacctcgccgccgcc
ctccccctcccccagtgtgttgtctggggcatcatgccaatgacagttgctcgaagcagc
aaccatgtcaaccacaccatctctttgctgatcatacttcagtacatcccccgcctcatc
atcatcttcccgctcaactggcggatcatcaagaacactggcgtcgttgccaagactgct
tggaccggagcggcctacaatctcattctctacttgctagcaagccatgctctgggagca
atatggtacttgatgtccgtggagagaatctattcgtgctggagagattactgcgcactc
gaagggagatctgtttgcaacactagctattttgattgcttgtcgacgctccctgggcat
gatgcttggcataactccacccttgtcttccagagatgcgatggccagactggcgtttac
aattttggaatgttcgagattgctttgtatgatcatattgcttctgtcaatttcttcgaa
aaatacttttattgtttgtggtttgggttgaaaagtttaagttcgtacggacagagtatg
gaggcgagtgctaaggtaaccgagacaatatttgggattcttgtttgcataatggggcta
ctcttcttctcgcttctcattggcaatgtccagacgtatctgcaatctacaacagcaaga
ctcgaagaatggagagtgaaaagacgagacaccgaggaatggatgcgacaccggcagctc
ccacccaatctgcaggagcgcgtcaggcggttcgtccagtacaactggctctccaccaga
ggcgtcaaggaagaagagattctacatgaattgcccctagacatccgccgcgaagtccag
aagcatctctgtctggatctcgttcgtcgtgtccctttcttttcgaagatggacaaccaa
ctcttggacgcgatatgccagcgactagtctcatccctaaacaccaaaggcacgtttata
gtgcgcgagggcgatccggtgaacgagatgctgttcataatccgggggcagctggagagc
tccaccacagacggcggccgctcaggattcttcaactccataaccctcaaggtaggcgac
ttctgcggcgaggagcttctgaactgggccctgatggccacatcccacctcaacctccca
gcctccacgcggacagtgaagtgcatcaccgaggtggaggcctttgccctccgcgcggac
gacctcaagttcttcgccgcgcagttcaagcgcctccacagcaagcggctgcagcactcg
ttccgctactactcccaccagtggcggacatggggcgcgtgcatcctgcaggcggcgtgg
aggcgcttccgcaggaggaagctcgctgatgagctctccaggcaggagagcatgatgagt
ttgcaggatgtagactacggtgatgatgacgacgacgatgacccatcccggcgcgggagc
agtgcactcactgcggctctcttggctaagagatttgccaagaaagcaaagagagggaca
tccactcttaggaagcttaaaattcttgctggagagtccacttcgccaatacctaagctc
tttaagcctgatgagcctagtttctga
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