Salvia hispanica (chia): 125220490
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Entry
125220490 CDS
T09851
Name
(RefSeq) chloride channel protein CLC-c-like
KO
K05016
chloride channel 7
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shis01009
]
125220490
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125220490
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shis04040
]
125220490
Protein phosphatases and associated proteins [BR:
shis01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125220490
Membrane trafficking [BR:
shis04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
125220490
Ion channels [BR:
shis04040
]
Chloride channels
Chloride channel (CLC)
125220490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
125220490
NCBI-ProteinID:
XP_047978616
LinkDB
All DBs
Position
4:17027606..17029828
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AA seq
586 aa
AA seq
DB search
MVNLVPHAHILGSILAVSAGLVVGKEGPMVHTGACIANLLGQGGSRKYGFTWKWLRYFKN
DRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAATWWRSALLWRTFFTTAITTVVLRGL
INFCRGGNCGLFGQGGLIMFDMHSSVPTYTNADLLAVVLIGVVGGLLGSLYNFFVDKVLR
AYTFVNERGPFYRILLVTVISLLTSCVAYGLPWFAKCIPCPSGTDKECPKIGNLHCQPGH
YNDLASLFLSTNDDAIRNLFSSEKGNELEISTLIIFFTGTYFLGIVTYGIAVPSGLFIPV
ILAGATYGRLVGRLLGSLSTLDLGLFSILGAASFLGGTMRMTVSLCVILLELTNNLLMLP
LIMLVLLISKTVGDSFNRGIYDQIVKMKGLPYLEAHAEPYMKHLAAGDVCSGPLITFSGI
EKVGNIMHALEMTGHNGFPVVDEPPFTDAPELCGFVLRSHLLVLLNRKKFAKNRAVCGGQ
ALRMFDSFDFAKPGLGKGLKVGDLDLTADEMEMYVDLHPITNSSPYMVVETMSLAKAAIL
FRQLALRHLCVIPKTPGRNPVVGILTRHDFMPEHVLGLYPELIHHK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatttagttcctcatgctcatattcttggttccattctggcagtttctgctgga
ttggttgttggtaaggaaggaccaatggtgcatactggtgcctgtatagcaaatttactt
ggacaaggaggctctcggaagtatggtttcacttggaagtggctcagatacttcaaaaat
gacagagaccgaagggatttgattacttgtggggctgctgctggtgtggctgccgctttt
cgcgccccagttggtggtgtacttttcgcccttgaagaagctgccacttggtggaggagc
gctctactatggaggaccttcttcacaactgctattacaactgttgtattgagaggtctc
ataaacttttgccgtggtggcaactgtggactcttcggacaaggaggactcatcatgttc
gatatgcattcttcagtccctacttatacaaatgcagatctgcttgcagttgtactaatt
ggagttgttggaggtcttttaggaagcctatacaatttttttgtggacaaagtgttgaga
gcatataccttcgtcaatgagagaggccctttttacaggattcttcttgtcacagttatt
tcccttctaacatcgtgtgtcgcctacggcctgccttggtttgccaagtgcattccatgt
cccagcggcacggataaagagtgccccaagattggaaacctccattgtcagcccggacat
tacaatgatctggcgtcccttttcctcagcaccaacgatgatgccatccgcaacctgttt
agttcggaaaaaggcaatgagttagaaatctccacactgatcattttctttactggaacc
tatttcctaggcattgttacttatggcattgctgtcccctctggcctcttcattcctgtc
atacttgctggagccacatacgggcgcctcgttgggaggctattgggctctttgtctact
cttgacctcggcctcttttccattctgggagctgcttcgttcctcggtggcaccatgagg
atgacagtatcgctttgcgtcatactcctagagcttaccaataacctactcatgctccct
ttaataatgcttgtcctcctcatttcgaagacagtgggagacagtttcaaccgcggtatc
tacgatcaaattgtgaagatgaaagggctgccatacttggaagcccatgcggagccatac
atgaagcacctggctgcaggggacgtttgctccggcccgttgatcaccttctctggcatt
gagaaggttgggaatataatgcatgctctggagatgaccgggcacaacgggtttccagtg
gtcgatgagcctccattcacagatgcaccggagctctgtggcttcgtgctgaggtctcat
ctactggtgctgctcaaccggaagaagttcgccaagaacagggcggtgtgtggtggtcag
gctctgaggatgttcgattccttcgacttcgctaagcctgggctggggaaggggcttaaa
gtcggcgacttggacttaaccgcggatgaaatggagatgtatgttgatctccatcctatc
accaactcatcaccttacatggttgtagagaccatgtctcttgccaaagctgccatcctc
tttcgacaacttgccctccgacacttgtgtgttatccccaaaacgcccgggcgaaatccg
gtggtcggaatcttgacaaggcacgattttatgccggagcatgtattggggctctaccct
gagcttatccaccacaagtag
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