Salvia hispanica (chia): 125221070
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Entry
125221070 CDS
T09851
Name
(RefSeq) far upstream element-binding protein 2 isoform X1
KO
K13210
far upstream element-binding protein
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125221070
03041 Spliceosome [BR:
shis03041
]
125221070
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125221070
Spliceosome [BR:
shis03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125221070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
125221070
NCBI-ProteinID:
XP_047979156
LinkDB
All DBs
Position
4:complement(57298508..57304457)
Genome browser
AA seq
757 aa
AA seq
DB search
MADESVITPPEASPAASAAGDGLKRKLEEIEQSDAPAAVTEPENTSDIDALKSGSQEEGN
GGVDESEAKRPRLESNGDDVAEADGSAVPQNGHTEEGKEEEPEVEKEEETKEEKEEETKE
EKEVESKEEKEDEPKEESEKPETEDDNGQSLGVQEPVKEPQETATVETAPSDTEKTDVGS
AEEAGQPNAESEEEPSNLPREGDVPVQSADRLPGSDTILSRKMEVPNDKVGVLIGKAGDT
IRSLQDNSGAKIQIVRDADADPRAVSRPLELVGTLESINRAERLIKGVIAEADAGGSPSL
VARGFNTAQAASGGELLEIQVPVEKVGLIIGKGGETIRNLQTRSGARIQLIQPNGAADQS
SEKMVRVTGNKKQIDTAREMIKEVMNQTVSRPSPLSGGYNQQGYRPRGPPAPQWGPRSSH
HAQYSGYDYPHRGQYPSQSSQYPPPYGNYPPPQAPRNFGPSWEQRPPASMHGPPPQGGYN
YGQQQGPDYGHSAPYPQAPSQPYGHGYNEAKYDHPASAQHYGHMSSQPTPYAQGGAHSGY
GHQDQYNKPPMYGVQPQAPHSESYGQPRPNQPGEAPYQGPGSATQTYGQNMPSQQSYPYV
SSAPMQQSYPSYGGTTDGYGHTPTAASASAYPPQGGQPGYGQPGAQQPPAYSQAAPVAGG
YGSYPTAQPGYAEQPAANNTAYGYQGSTDPAYGATQATAAYPATAAAQSGYAQTQPTYDQ
SGGYGNVPTAAATYGKSASPKAAYQQYDSSQMYGAHR
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgagagcgtgatcacgccgccagaagctagccccgctgcatccgccgccgga
gatggcctcaagaggaagctcgaagaaattgagcagagcgacgctcctgcggcggtgacg
gagcctgagaacacctcggatattgacgctttgaagagcggatcgcaggaggaggggaat
ggcggtgtggatgaatctgaggctaaacggccccgtttggagagcaatggcgatgatgtt
gccgaggctgatggctcagcagttccacagaacggacacacagaagaggggaaggaggaa
gaacctgaagtggagaaggaagaagaaactaaagaggagaaggaagaagaaactaaagag
gagaaggaagtagaatctaaagaggagaaagaagatgaacctaaagaggagtctgagaag
cctgaaactgaggatgataatggccaatctttgggggtccaagaacctgtcaaagagcct
caagagacagccactgtagaaaccgctcctagtgacactgagaaaactgatgttggaagt
gctgaggaagcagggcaaccaaatgcagaatctgaagaagagccctccaatctgccgaga
gagggggatgttccagttcagtctgctgacaggctgccaggttcagatacaatactgtca
cgtaaaatggaggttcctaatgacaaggttggagttctaataggaaaggcaggggataca
attcggtctctgcaggataattctggtgccaaaattcaaattgtgagggatgctgatgca
gatccccgagcagtatccaggcctttggaactagttgggaccttggaaagtataaatcgg
gcagaaagattgataaagggcgtgattgcagaggctgatgctggaggttcaccctcactt
gttgctcgaggattcaacacagctcaggctgccagtggtggtgagctacttgaaattcaa
gtcccagttgaaaaggttggtttaataattggaaagggcggagaaacaatcagaaacttg
cagacaagatctggggcacgcattcagcttatacaaccaaatggtgctgccgaccaatct
agtgaaaagatggtccgtgtgactggtaacaagaagcagatagatactgcaagagaaatg
atcaaagaagttatgaatcagaccgtgagcagaccatctcctctctctggaggatacaac
cagcagggatatcgtccacgtggacctcctgctccacaatggggaccaaggagctctcat
cacgcgcaatactctggttatgattatccacacagaggacaatatccttctcagagttca
caatatcctcccccatatggtaactaccctccaccacaggctccgagaaactttggtcca
agctgggagcaaagacctccagcatcaatgcatggacctccacctcagggcggctacaat
tacgggcagcagcagggcccagattatgggcattcagctccttacccgcaagctccttca
caaccgtatggacatgggtataacgaggctaaatatgatcaccctgcttccgcacaacat
tatggccacatgagctctcagccaacaccatatgctcagggcggtgcccactcgggttat
ggtcatcaggaccaatacaataagccaccaatgtacggcgtgcagccacaagcacctcat
tctgagtcctatggtcagcctaggcctaatcagcctggagaagcgccttaccaaggccct
ggctcagccactcaaacatacggccagaacatgccgtctcaacagtcttacccctatgtg
tcaagtgcacctatgcaacaaagctatccttcctacgggggcacaactgacggatatggc
catactcccactgcagcatctgcttctgcgtatcctcctcaaggtggtcagcctgggtat
ggtcagccgggagctcaacagccaccggcatattctcaggcagcacctgttgctggtggt
tatggttcataccctacagctcaacctggttatgccgagcaaccagctgccaataataca
gcatatgggtaccaagggtccacagatccggcttatggtgctactcaagcaacagcagct
tatcctgcgactgctgctgcacagtcgggctatgctcaaactcagcctacctacgatcag
tctggtggctatgggaatgttcctacagcagcagctacttatggaaagagtgcgtcgccc
aaagctgcttatcaacaatacgattccagtcagatgtacggtgcacatcgttga
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