Salvia hispanica (chia): 125221155
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Entry
125221155 CDS
T09851
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125221155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125221155
Spliceosome [BR:
shis03041
]
Common components
Common spliceosomal components
SR proteins
125221155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_Nup35
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125221155
NCBI-ProteinID:
XP_047979241
LinkDB
All DBs
Position
1:complement(51675618..51677862)
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AA seq
262 aa
AA seq
DB search
MSHFGRSGPPDIRDTFSLLVLNITFRTSADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYQDEAAKAVEKLDGRVVDGREIMVQFAKYGPNAERIDKGRIEEPVYKSKGRSRSR
SPRPRYDDRDRDYRRSSETRSRGRSERESYRGRHRESSYRSRSRSRSRSRSASPAYRRER
GRGKYDDGDRRRRSRSYESASPVRRSLTPRRSPSPNKSPLSRDGSPDVRHAKIERSATPK
SVSPRGRRRDSRSPSPHDEADE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcgggagatctgggccgccggacatcagagacaccttctctctcctcgtc
ctcaacatcactttccgtacttcagctgatgacttgttccccctgtttgataagtacggc
aaggtggttgatgtgttcattcctcgggaccggagaactggagactccaggggttttgca
tttgtgcgatataagtatcaagatgaggctgcaaaagcagttgaaaagctggatggaaga
gttgttgatgggagagaaataatggttcaatttgctaaatatggacccaatgctgaacga
attgataaaggtagaattgaggaacctgtttacaagtctaaaggcaggtcaagaagccgc
agtccacgccccaggtatgatgacagggatcgggactacaggaggagcagtgaaacgaga
agtaggggaagaagtgagcgtgagtcttatcgtggtaggcatagggaatcttcctatcga
agcaggagtcggtccaggagccgaagccgtagtgcaagtcctgcctatcgcagagaacgc
ggtagaggaaaatatgatgatggcgatagacgtagacgaagtcggtcttatgaaagtgca
tctcctgttcgacggagtctcactcctcggagatctccttccccaaacaaatcacctcta
tctagggatggaagtcctgatgtgcgtcatgccaaaattgaacgatctgccacccctaag
agtgtctctcctcgcggccgccgccgtgattctcgtagcccgtctccacatgatgaggct
gatgaataa
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