Salvia hispanica (chia): 125221264
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Entry
125221264 CDS
T09851
Name
(RefSeq) pollen-specific leucine-rich repeat extensin-like protein 3
Organism
shis
Salvia hispanica (chia)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_1
LRR_14
LRR_8
LRRNT_2
LRR_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125221264
NCBI-ProteinID:
XP_047979346
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Position
4:complement(47986087..47989704)
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AA seq
929 aa
AA seq
DB search
MEIKTLGCCLLLILSHLAIPSFSQRIFQAGLGVGAHSQTGSEALSESEETTDPDLESTPT
PEPHTTTISLGKDRENEKEPTLTPEPNNNEEPDVEPTQHTKEKESHIENEKESTLTPEPN
NNEEPDVEPTQHTKENESHIENEKEPTLTPDPNNTEEPDVEPTQHTKEKESQKSDNHGES
DNETTSDPEEKESTPTPKASNHKESEMCSYKCASEPTPKLANQRLEGAYKALRALKKSIY
SDPNGFTSNWEGPDVCSYKGVFCAKAMDDANILVVAGVDLNHGDIAGHLPSEIGYLVDIS
LLHLNSNRFCGIIPKEIKNLKLLYELDVSNNRFVGCFPEVVLELPQLKYLDLRYNDFEGE
LPPELFDKPLDAIFLNNNRFHSTIPENIGNSSASVIVMSNNHLSGCIPSSIGKMAGKLDE
FVVSYNELSGCLPEEITMLNTTKVFDISNNKFMGDLPQGMENMKSIEVLNIGNNKFRSKV
SKTVCTLTNLKNFTYSYNFFDAQDPECMINALPIVAIDGRKNCLPREPNQRPEKECRIAL
SKKVDCNAGCRPPTHGHSTSCRPPKSIPSAPTPKPTPSLKPEPTPKPEKTFVPSQIPKAS
PPPKMETPTPAPSPEPSKPPLRQKRVAPRLASSPPPVHSLPPESPPPIHSPPPPVKLPPP
VVHSPPPSPPVHSPPPPVKSPPPPVHSPPPPVHSPPPPVKSPPPPVHSPPPPPVKSPPPP
VHSPPPPVKSPPPPVHSPPPPVKSPPPPVHSPPPPPVKSPPPPVQSPPPPVKSPPPPVHS
PPPPVKSPPPPVHSPPPPPVKSPPPPVHSPPPPVKSPPPPVHSPPPPVKSPPPPVHSPPP
PVKSPPPPVHSPPPPPVKSPPPPVHSPPPPVKSPPPPVHSPPPPVKSPPPPVHSPPPPPV
KVTTAPSPLPTSSSQVTTTTSPLSTTSSS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaaaccttgggctgctgtctcctcctcatcctttctcaccttgccatccct
tccttctctcagcgaatattccaagctggattaggtgttggtgcccatagtcaaacaggc
tccgaagcactgtcggagtccgaagaaaccacagatcccgatctggaatcaaccccaaca
cccgaaccacatacaacaacaatctccctagggaaagacagagagaatgagaaagagcca
acccttacacccgaacccaacaataatgaagaaccagatgtcgagccaacccaacatacc
aaagagaaagagtcacacatagagaatgagaaagagtcaacccttacaccagaacccaac
aataatgaagaaccagatgtcgagccaacccaacataccaaagagaatgagtcacacata
gagaatgagaaagaaccaacccttacaccagatcccaacaatactgaagaaccagacgtc
gagccaacccaacataccaaagagaaagagtcacaaaaatctgacaatcacggagaatca
gacaacgagacaacctcggaccccgaagagaaagagtcgactcctactcccaaagcaagc
aatcataaagaatcagagatgtgcagctacaaatgcgcctctgagccaactccgaagctt
gccaatcagaggctagaaggagcctacaaagccctgcgggcattgaaaaaatccatatac
tctgatccaaatggcttcacaagcaattgggagggtcccgatgtgtgcagttacaaaggc
gtcttttgtgccaaggctatggacgatgccaatatcctagtggtggccggtgttgacctt
aaccatggcgatatcgctggtcacctcccctcagagatcgggtacctagtcgacatcagc
ctcctccatcttaattccaatagattttgtgggatcatcccaaaagagatcaagaacctc
aagctactgtacgagttggacgtgagcaacaaccgctttgtggggtgtttcccggaggtg
gtgttggagttaccgcaactcaaatacctcgacttacggtacaatgactttgaaggcgag
ctacctccggagctcttcgacaagccccttgatgcaattttcttgaacaacaacagattc
cactcaaccatcccggaaaacattggtaactcttcggcctccgtcatcgtaatgtcaaac
aaccatctctctgggtgcattccgtccagcatcggaaagatggcaggaaaattggacgag
tttgtggtttcgtacaatgagttgtcagggtgccttccagaagagatcacaatgttaaac
acgaccaaagtttttgatatctccaacaataaatttatgggcgacctaccgcaggggatg
gaaaacatgaagagtatagaggtactcaatattgggaataataaatttaggagcaaggtt
tcgaaaactgtttgcaccttgacgaatcttaagaacttcacctattcttacaacttcttt
gatgcccaagatcctgagtgtatgatcaatgcgcttcccattgtggctattgacggtagg
aagaactgcttgcctcgagaacccaatcagaggccagagaaggagtgtcgcatagccttg
agcaagaaggttgactgcaatgccggttgtcgacccccgactcatggccattcgaccagt
tgtcgacctccaaaatccattccatcagctccgactcctaaacccacaccttcgctgaag
cctgagccaacacctaaacctgagaagacgtttgtcccgtcccagattcccaaggcatca
cctcctcctaaaatggagacaccaacccctgccccctcaccggaaccatctaagccgcct
ttacgacaaaaacgtgttgccccacgcctcgcttcttcgccacctccagtccactctttg
ccgcccgaatcgccacccccgatccactctccacctcctccagtcaagttgccaccacct
gtggtccactcgccaccaccatcgccaccggttcattctccacctcctccagtcaagtca
ccaccacctcccgtacactccccaccacccccagtccactctccacctcctccagtaaag
tctccaccgcctccagtccactcaccgccacctcctccagtcaaatctccaccacctcca
gtccactctccacctcctccagttaaatcgccaccacccccagtacactctccacctcct
ccagtcaagtctccaccgccccctgtccactcaccgccacctcctccagttaagtcccca
ccacctccagtccagtctccacctcctccagttaaatcgccaccacccccagtacactct
ccacctcctccagtcaagtctccaccgccccctgtccactcaccgccacctcctccagtc
aagtcgccaccacccccagtccactctccacctcctccagtcaagtctccaccaccccca
gtccactcaccacctcctccagttaaatcgccaccacccccagtacactctccacctcct
ccagtcaagtctccaccgccccctgtccactcaccgccacctcctccagtcaaatcacca
ccgcccccagtccactctccacctcctccagttaagtcgccaccacccccagtacactct
ccacctcctccagtcaagtctccaccgccccctgtccactcaccgccacctcctccagtc
aaagtcaccaccgcccccagtccactccccacctcctccagtcaagtcaccaccaccacc
agtccactctccaccacctcctccagttaa
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