Salvia hispanica (chia): 125221432
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Entry
125221432 CDS
T09851
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR17
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125221432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125221432
03036 Chromosome and associated proteins [BR:
shis03036
]
125221432
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
125221432
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
125221432
RSF complex
125221432
WICH complex
125221432
B-WICH complex
125221432
NORC complex
125221432
BRF complex
125221432
NuRF complex (fruit fly)
125221432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
ResIII
HAND
Myb_DNA-binding
DEAD
DBINO
YnfE
AAA_14
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
125221432
NCBI-ProteinID:
XP_047979508
LinkDB
All DBs
Position
4:55065036..55071430
Genome browser
AA seq
959 aa
AA seq
DB search
MAKPSRSSDDSLTSSSAEEEVVKDQVNDEEDDDELEAVARPAEDSDDEDAPNDVVQDDDE
IEEEDVVANETAKRERARLREMQRVKKQKIQEILDDQNAAIEADMNNKGKGRLNYLLQQT
ELFAHFAKGDQSVQKKGKGRGRHASKITEEEEDEECLKEEEDGLSGTGNTRLLVQPSCIQ
GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHEFRGITGPHMVVAP
KSTLGNWMNEIKRFCPVLRAVKFLGNPDERRYIREELLVAGKFDVCVTSFEMAIKEKTTL
RRFSWRYIIIDEAHRIKNENSLLSKTMRLFNTNYRLLITGTPLQNNLHELWALLNFLLPE
IFSSAETFDEWFQISGENDEHEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMS
QMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYSTGEHLI
ENAGKMVLLDKLLPKLKERDSRVLIFSQVGTMTDFIATFRILYLLWIDYIYCILAEQKTV
NKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMD
DTADLYDFDDDKDENKLDFKKIVSDNWIEPPKRERKRNYSESEYFKQTMRQSGPARPKEP
RIPRMPQLHDFQFFNTQRLSELYEKEVRHLMQTHQRNQVKDTIDVDEQEDVGDPLTVEEQ
EEKEQLLEEGFSAWSRKDFNSFIRACEKYGRNDVSGIASEMEGKTEEEVERYAKVFKDRY
KELNDYDRIIKSIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEEC
DRFMICMVHKLGYGNWDELKAAFRTSPLFRFDWFIKSRTTQELARRCDTLIRLVEKENQE
YDERERQARKEKKLAAKQNNTTPSKRSAARQAAESPPSTMKKRKQASMDDYVSSGKKRK
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccctcgcgttcatccgacgactcgctgaccagctcctcggccgaggaggag
gtggtcaaggaccaggtcaatgacgaagaagacgacgacgagctcgaggcggtggctcgc
cccgctgaagactccgacgacgaggatgctcccaacgatgttgtccaggacgatgatgaa
attgaggaagaggatgttgttgcaaatgaaactgcaaagcgtgaaagagcaaggcttaga
gaaatgcagcgggtaaaaaagcagaaaatacaagaaatacttgatgaccagaatgctgct
attgaggctgacatgaacaacaaaggaaagggtcgattgaactatctgttacagcaaact
gagttatttgctcactttgccaagggtgatcaatctgttcagaaaaagggcaagggaagg
ggtcgccatgcgtcgaagataactgaagaggaagaagatgaagagtgtcttaaagaggaa
gaagatggcctttctggcactggaaacactagactattggtgcagccctcttgtattcag
ggtaagatgagggactaccagctagctggtttaaattggctgattcggctgtatgagaat
ggcattaatgggatacttgctgatgaaatgggtcttggtaaaactttgcaaacaatctcc
ttgatgggctacttgcacgagttcagaggaattacaggtcctcacatggttgttgctcca
aaatccacacttggaaattggatgaatgaaattaaaaggttttgccctgtactgcgtgct
gtaaagttccttggaaatcctgatgaaaggagatacattcgtgaggagttacttgttgct
ggcaagttcgatgtctgtgtaacaagttttgagatggctatcaaagagaagactacactg
cgccgatttagttggcgctatatcattattgacgaagcccatagaattaagaatgagaat
tcccttctctcaaaaacgatgagactctttaatactaactatcgacttcttataactgga
acaccacttcagaataatcttcatgaactatgggctctcctcaactttttgcttccagaa
atatttagctctgcagagacgtttgatgagtggttccaaatttctggtgaaaatgacgaa
catgaagttgtccaacagcttcacaaggttctccggcccttccttcttagaaggctaaaa
tctgatgtcgagaaaggtttacctcccaaaaaggagacaatacttaaagttggtatgtcc
caaatgcaaaagcaatactataaggcattgctacagaaagatcttgaggtggtaaatgct
ggtggagaacgcaaacgccttcttaatatagccatgcagctccgaaaatgttgcaatcat
ccatatttgtttcaaggtgcagagcctggcccaccttatagcacaggagaacatctaatt
gaaaatgctggcaagatggttcttcttgataagttgctgccaaaactaaaggagcgtgat
tccagggttttgatattttcccaggttggaaccatgaccgactttattgctactttcaga
attttgtacctcttatggattgattatatttattgtatactagcagaacaaaagactgtg
aataaggatgagttattgcaaatggtgagattcggcgctgaaatggttttcagctccaaa
gatagcacgatcacagatgaggatatagatcgtataattgccaagggagaagaagcaaca
gctgaacttgatgccaagatgaaaaaatttactgaagacgccatcaaattcaaaatggat
gacactgctgatttgtatgatttcgacgatgataaggatgaaaataagttagattttaag
aaaattgttagtgataattggattgaaccaccaaaaagagaaaggaaacgcaactactca
gaatcagagtacttcaagcagacaatgcgtcaaagtggtcctgctaggcccaaggagcct
cgaattcctcgcatgccgcaattgcatgatttccaattcttcaacacacagcgtcttagt
gagctttatgagaaagaagtgcgtcatcttatgcaaacacatcaaagaaatcaagtaaaa
gataccatagacgtggatgaacaagaagatgtgggagaccccttgacggttgaggagcag
gaagagaaagagcagttactggaagaaggattttcggcttggagcagaaaagactttaac
agctttatcagggcctgtgagaagtatggtcggaatgatgtcagtggtattgcttctgaa
atggaagggaaaacagaggaagaagttgaaagatatgccaaagttttcaaggatagatac
aaagaactcaatgattatgataggatcatcaaaagcattgaaagaggagaagctaggata
tcacggaaggatgagatcatgaaagcaattgggaagaagctggatcgctataaaaaccct
tggctggaattgaagatccagtatggccagaacaaagggaagttgtacaatgaggaatgt
gatcgcttcatgatatgcatggttcataagcttggatatggcaactgggatgagctcaag
gcagccttccgtacttcacctttgtttcgcttcgattggtttataaagtctcgtaccaca
caagaacttgcaaggagatgtgacacactaattaggctggtagagaaggaaaaccaggaa
tacgatgagagggagaggcaggcacgcaaagagaagaaactagctgccaagcagaacaac
acaaccccatccaagcgctccgctgctagacaggctgcagagagccccccatcaacaatg
aagaagcggaagcaagcatcaatggatgactatgtgagctcgggaaagaagaggaaatga
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integrated database retrieval system
