KEGG   Salvia hispanica (chia): 125221646
Entry
125221646         CDS       T09851                                 
Name
(RefSeq) regulatory-associated protein of TOR 1 isoform X1
  KO
K07204  regulatory associated protein of mTOR
Organism
shis  Salvia hispanica (chia)
Pathway
shis04136  Autophagy - other
shis04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:shis00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    125221646
   04136 Autophagy - other
    125221646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:shis04131]
    125221646
Membrane trafficking [BR:shis04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    125221646
SSDB
Motif
Pfam: Raptor_N WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_IFT122_1st Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd DSE1_N HEAT Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_EML Beta-prop_TEP1_2nd HEAT_2 HEAT_EZ Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd PEP5_VPS11_N ASA1 EIF3I WD40_Gbeta Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_WDR41
Other DBs
NCBI-GeneID: 125221646
NCBI-ProteinID: XP_047979786
LinkDB
Position
4:complement(39718788..39728807)
AA seq 1375 aa
MALGDLMAASRFSQSTTAVSNHLEEFAENGNHVEEDGERNGYSSSSIVDTNDANARDLAE
TASSSYVEMTTTTSMAYLPQTIVLCELRHEGFEDCVPAGPSDSGLVSKWRPRDRMKTGCV
ALVLCLNISVDPPDVIKISPCARMECWIDPFSMAPHKALESIGRTLNQQYERWQPKARYK
YSLDPTVDEVKKLCTTCRKYAKSERVLFHYNGHGVPKPTPNGEIWLFNKSYTQYIPLPIS
DLDSWLKTPSIYVFDCSAAGLIISAFIQLQDYSSSSSGAPTRDCILLAACEAHETLPQSA
EFPADVFTSCLTTPIKMALRWFCTRSLLHESFDYSLIDRIPGRQTDRKTLLGELNWIFTA
VTDTIAWNVLPHDLFQRLFRQDLLVASLFRNFLLAERIMRSANCSPISYPMLPPTHQHHM
WDAWDMAAEICLSQLPSLVEDPNVEFQPSPFFTEQLTAFEVWLDHGSEHKKPPEQLPIVL
QVLLSQCHRFRALVLLGRFLDMGPWAVELALSVGIFPYVLKLLQTTTPELRQILVFIWTK
ILALDKSCQVDLVKDGGHAYFIRFLDSVEAYPEQRAMAAFVLAVIVDGHRRGQETCIEAG
LIHVCLKHLQCSSPNEAQTEPLFLQWICLCLGKLWEDFSEAQLLGLQADASATLAPLLSE
PQPEVRAAAVFALGTALDIGFDTSRDGHGDEDCDDDDKVKAEASIIKNLLNVVSDGSPLV
RAEVAVALSRFAFGHNKHLKSVAAAYWKPQSGSVLTSLPSFAVKGSSSGYTTPTHYMPHG
SIVPSPIAPLLRVGNDSQPAIRDGRVSTSSPLATSGIMHGSPLSDDSSLHSDSGAPNDSG
SNGVLHHSRRKPLDNALYSQCVLAMCNLAKDPSPRVASLGRRVLSVIGIEQVVAKSVKPA
GASARLGESAASSSLAGLARSSSWFELNGGAHLPLTFRTPPVSPPRPSYLTKMRRVCSLE
FRPHLINSPDSGLADPLLASAGPSGASERSLLPQSMIYNWSCGHFSKPLLTATDDSEDLI
ARREESEKLALDHIVKCKHSSVSKLHNQIASWDTKFETGTKTALLQPFSPVVIASDENER
IRVWNYEEATLLNSFSNHDYPDKGVSKLCLVNEFDENMLLVASNDGNIRIWKDYSSKGQQ
KLVTAFASIQGHKPGAHGVNAVVDWQQQSGYLFSSGDISSIMAWDLDKEQLVNTISLPQE
SSISALAVSQVHGGQFAAGFVDGYVRLYDIRTPEMLVTETRPHTQRVERVVGIGFQPGLE
PAKIVSASQAGNIQFLDMRSAKNTYLTIDAHRGSLTALAVHRHAPLIASGSAKQLIKVFN
LEGDPLGTIRYYPTFMAQKIGSVSCLTFHPYQVLLAAGAADSCVSIYAEEISPPR
NT seq 4128 nt   +upstreamnt  +downstreamnt
atggcattgggggatttgatggcggcatcgcggttttcacagtctaccacggcggtttcg
aatcacttggaggagttcgctgagaatgggaatcatgtcgaggaggatggcgaaaggaat
ggatatagtagcagtagcattgtcgatactaatgatgccaatgcccgtgatttagcggag
accgcgagcagcagctatgtggaaatgaccaccacgacgagcatggcttacttgccgcag
actatagtgttgtgcgagcttcggcacgaaggatttgaggactgcgtgcctgcagggccg
tcggatagcggtttagtctctaaatggcggccccgggatcgaatgaagacaggatgtgtt
gccttagttttgtgtttaaatatcagcgttgatccacctgatgttataaagatatctcct
tgtgcacggatggaatgttggattgatccattttcaatggcaccacacaaagctcttgaa
tcaattggaagaaccttgaatcaacaatatgaaaggtggcaacccaaggctcgttacaag
tattcattggaccccactgttgatgaagtaaagaaactgtgcacaacatgccgcaaatat
gcaaaatctgaaagagttctgttccactacaatggacatggagtgcctaagccaactccg
aatggtgaaatttggctgtttaataagagttatacacagtacatccctttgccaataagt
gatttggattcctggctgaagacaccttctatatatgtgtttgactgctctgctgctggg
ctcattatcagtgccttcattcagctccaagattattctagttcttcttccggagctccg
acgagggattgcattttacttgctgcctgtgaagctcatgagacacttccacaaagtgct
gagtttcctgctgatgtatttacttcttgcctcacgacgcctattaaaatggctttaaga
tggttttgcactcggtcgctgctacacgagtcctttgattattctctgatagatagaatt
cctggacgccaaacagacaggaaaacccttcttggggaattgaactggatattcacagct
gtaactgacactatcgcctggaatgtacttccacatgacttgttccagcggttgttcagg
caagatcttttggttgccagcttgtttagaaactttttgctggctgaaaggataatgcga
tctgcaaattgttcaccaatttcatatccaatgttgccacctactcatcagcatcatatg
tgggatgcatgggacatggctgctgaaatctgtctttctcagcttccaagtttagtcgag
gacccaaatgtagagttccagccgagcccatttttcactgagcagctaacggcttttgaa
gtgtggcttgatcatggatcagaacataaaaagcctccggagcagttacccattgttctt
caggtcttactcagtcaatgccatagatttcgggctctggtgctccttggtagatttctg
gatatgggaccttgggccgtggaactggccttatctgttggaatatttccttatgtcctg
aagctcttacaaactaccactccagagctgcgacaaattcttgtgttcatctggacaaag
atcctagcgctggataagtcttgtcaggtcgatcttgtgaaggatggagggcatgcatac
ttcattaggtttcttgatagtgttgaagcctatcctgagcaacgtgcgatggctgcattt
gtgttggccgtcattgtagatggtcatagacggggtcaggagacctgcattgaagctggt
cttatacatgtttgcctcaagcacctccaatgctcatctcctaacgaggcacaaactgaa
cctttgttccttcagtggatatgcttgtgccttgggaaactatgggaggacttttcagag
gctcaactgttaggcctgcaggctgatgcgtctgctactcttgctcctctactttccgag
ccccaaccagaggtccgtgcggcagctgtttttgctctaggcactgccctagatatagga
tttgacacgtcaagagatggtcatggagatgaagattgtgatgatgatgataaagttaag
gctgaagccagtattataaaaaaccttttgaatgttgtttctgatggaagcccattggtg
cgagctgaagttgctgtggctctttcacgttttgcctttggccacaacaaacacctgaag
tcagttgctgctgcatattggaaaccccagtctggttctgtactcacttccttgccatct
ttcgcagtcaagggttctagtagtggctataccactcccactcactacatgcctcatgga
agtatagttccatctccaatcgcgccattattacgagttggaaatgacagccagcctgct
attcgcgatgggagagtatccacaagtagccctcttgctacctctgggataatgcatggg
tctcccctttccgatgattcatccctgcattctgattctggagcaccaaatgactctggc
agcaatggggttcttcatcattcaaggagaaaaccacttgataatgcactgtattcacaa
tgtgtattagctatgtgcaatctggcgaaggatccatctccacgtgttgcatcccttgga
aggcgtgtattatctgttattggtattgaacaagttgttgctaaatctgtcaagcctgct
ggtgcaagtgctcgtctaggtgaatcagcagcaagctccagcctggctggactagctcgt
tcgtcatcttggtttgaattgaatggaggagctcatttgccgctgacttttagaactcct
cctgttagtcctcctagaccaagctacttgactaaaatgcggagagtttgctccttggaa
tttagaccacatctgatcaattctccagattcagggctggcagatccacttttagcatca
gcgggaccatctggtgcttcagaacgtagtttacttcctcaatcaatgatctataattgg
agctgcggtcacttttcaaagccgcttcttactgcaacggatgatagtgaagatctgatt
gctagaagagaagaaagtgagaaattggcactcgatcatatagtaaaatgcaaacactca
tctgtgagtaaactgcataatcaaattgccagttgggataccaagttcgagacaggcacc
aaaactgctttgctgcaaccattctcacctgttgtgattgcttcagatgaaaatgaaagg
attagggtatggaattatgaggaagcaaccctgctcaacagtttcagtaaccatgattac
ccggacaaaggagtttccaagttgtgtcttgtaaatgaatttgacgagaacatgcttcta
gttgcatcaaatgatgggaatatacggatttggaaagattactcatcaaaaggacaacaa
aagttagttactgctttcgcttcgattcagggtcacaaacctggtgcccatggtgtgaac
gctgttgtggattggcaacagcagtcaggatatcttttttcttctggtgatatttcatct
atcatggcttgggatctggacaaagagcagcttgtcaataccatttccttgccacaagag
tcgagcatctcagcactggctgtttctcaagttcatggaggtcaatttgctgctggtttt
gtggatggttacgtcagattatatgatattcgtactcccgagatgcttgttactgaaacc
cggcctcacactcaacgagttgaaagagttgttggtattggcttccaacctggtcttgaa
ccagcaaagattgtgagtgcatcacaagcaggaaacatccagttcctagatatgagaagt
gctaaaaacacgtaccttacaatcgatgcccatagggggtcacttacagctttagccgtc
cacaggcacgcccctctcattgcaagtggctcggccaagcaactcatcaaggtcttcaat
ctggagggcgatccattaggcactattcggtactatcccactttcatggcccaaaagata
ggatcggttagctgcctgaccttccatccctatcaagtattacttgctgctggtgctgct
gattcttgtgtttccatatatgctgaagagatttcccctccaagatga

DBGET integrated database retrieval system