Salvia hispanica (chia): 125221646
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Entry
125221646 CDS
T09851
Name
(RefSeq) regulatory-associated protein of TOR 1 isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
shis
Salvia hispanica (chia)
Pathway
shis04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
125221646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125221646
Membrane trafficking [BR:
shis04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
125221646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
HEAT
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
HEAT_2
Beta-prop_TEP1_2nd
HEAT_EZ
WD40_MABP1-WDR62_2nd
PEP5_VPS11_N
EIF3I
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
125221646
NCBI-ProteinID:
XP_047979786
LinkDB
All DBs
Position
4:complement(39718788..39728807)
Genome browser
AA seq
1375 aa
AA seq
DB search
MALGDLMAASRFSQSTTAVSNHLEEFAENGNHVEEDGERNGYSSSSIVDTNDANARDLAE
TASSSYVEMTTTTSMAYLPQTIVLCELRHEGFEDCVPAGPSDSGLVSKWRPRDRMKTGCV
ALVLCLNISVDPPDVIKISPCARMECWIDPFSMAPHKALESIGRTLNQQYERWQPKARYK
YSLDPTVDEVKKLCTTCRKYAKSERVLFHYNGHGVPKPTPNGEIWLFNKSYTQYIPLPIS
DLDSWLKTPSIYVFDCSAAGLIISAFIQLQDYSSSSSGAPTRDCILLAACEAHETLPQSA
EFPADVFTSCLTTPIKMALRWFCTRSLLHESFDYSLIDRIPGRQTDRKTLLGELNWIFTA
VTDTIAWNVLPHDLFQRLFRQDLLVASLFRNFLLAERIMRSANCSPISYPMLPPTHQHHM
WDAWDMAAEICLSQLPSLVEDPNVEFQPSPFFTEQLTAFEVWLDHGSEHKKPPEQLPIVL
QVLLSQCHRFRALVLLGRFLDMGPWAVELALSVGIFPYVLKLLQTTTPELRQILVFIWTK
ILALDKSCQVDLVKDGGHAYFIRFLDSVEAYPEQRAMAAFVLAVIVDGHRRGQETCIEAG
LIHVCLKHLQCSSPNEAQTEPLFLQWICLCLGKLWEDFSEAQLLGLQADASATLAPLLSE
PQPEVRAAAVFALGTALDIGFDTSRDGHGDEDCDDDDKVKAEASIIKNLLNVVSDGSPLV
RAEVAVALSRFAFGHNKHLKSVAAAYWKPQSGSVLTSLPSFAVKGSSSGYTTPTHYMPHG
SIVPSPIAPLLRVGNDSQPAIRDGRVSTSSPLATSGIMHGSPLSDDSSLHSDSGAPNDSG
SNGVLHHSRRKPLDNALYSQCVLAMCNLAKDPSPRVASLGRRVLSVIGIEQVVAKSVKPA
GASARLGESAASSSLAGLARSSSWFELNGGAHLPLTFRTPPVSPPRPSYLTKMRRVCSLE
FRPHLINSPDSGLADPLLASAGPSGASERSLLPQSMIYNWSCGHFSKPLLTATDDSEDLI
ARREESEKLALDHIVKCKHSSVSKLHNQIASWDTKFETGTKTALLQPFSPVVIASDENER
IRVWNYEEATLLNSFSNHDYPDKGVSKLCLVNEFDENMLLVASNDGNIRIWKDYSSKGQQ
KLVTAFASIQGHKPGAHGVNAVVDWQQQSGYLFSSGDISSIMAWDLDKEQLVNTISLPQE
SSISALAVSQVHGGQFAAGFVDGYVRLYDIRTPEMLVTETRPHTQRVERVVGIGFQPGLE
PAKIVSASQAGNIQFLDMRSAKNTYLTIDAHRGSLTALAVHRHAPLIASGSAKQLIKVFN
LEGDPLGTIRYYPTFMAQKIGSVSCLTFHPYQVLLAAGAADSCVSIYAEEISPPR
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggggatttgatggcggcatcgcggttttcacagtctaccacggcggtttcg
aatcacttggaggagttcgctgagaatgggaatcatgtcgaggaggatggcgaaaggaat
ggatatagtagcagtagcattgtcgatactaatgatgccaatgcccgtgatttagcggag
accgcgagcagcagctatgtggaaatgaccaccacgacgagcatggcttacttgccgcag
actatagtgttgtgcgagcttcggcacgaaggatttgaggactgcgtgcctgcagggccg
tcggatagcggtttagtctctaaatggcggccccgggatcgaatgaagacaggatgtgtt
gccttagttttgtgtttaaatatcagcgttgatccacctgatgttataaagatatctcct
tgtgcacggatggaatgttggattgatccattttcaatggcaccacacaaagctcttgaa
tcaattggaagaaccttgaatcaacaatatgaaaggtggcaacccaaggctcgttacaag
tattcattggaccccactgttgatgaagtaaagaaactgtgcacaacatgccgcaaatat
gcaaaatctgaaagagttctgttccactacaatggacatggagtgcctaagccaactccg
aatggtgaaatttggctgtttaataagagttatacacagtacatccctttgccaataagt
gatttggattcctggctgaagacaccttctatatatgtgtttgactgctctgctgctggg
ctcattatcagtgccttcattcagctccaagattattctagttcttcttccggagctccg
acgagggattgcattttacttgctgcctgtgaagctcatgagacacttccacaaagtgct
gagtttcctgctgatgtatttacttcttgcctcacgacgcctattaaaatggctttaaga
tggttttgcactcggtcgctgctacacgagtcctttgattattctctgatagatagaatt
cctggacgccaaacagacaggaaaacccttcttggggaattgaactggatattcacagct
gtaactgacactatcgcctggaatgtacttccacatgacttgttccagcggttgttcagg
caagatcttttggttgccagcttgtttagaaactttttgctggctgaaaggataatgcga
tctgcaaattgttcaccaatttcatatccaatgttgccacctactcatcagcatcatatg
tgggatgcatgggacatggctgctgaaatctgtctttctcagcttccaagtttagtcgag
gacccaaatgtagagttccagccgagcccatttttcactgagcagctaacggcttttgaa
gtgtggcttgatcatggatcagaacataaaaagcctccggagcagttacccattgttctt
caggtcttactcagtcaatgccatagatttcgggctctggtgctccttggtagatttctg
gatatgggaccttgggccgtggaactggccttatctgttggaatatttccttatgtcctg
aagctcttacaaactaccactccagagctgcgacaaattcttgtgttcatctggacaaag
atcctagcgctggataagtcttgtcaggtcgatcttgtgaaggatggagggcatgcatac
ttcattaggtttcttgatagtgttgaagcctatcctgagcaacgtgcgatggctgcattt
gtgttggccgtcattgtagatggtcatagacggggtcaggagacctgcattgaagctggt
cttatacatgtttgcctcaagcacctccaatgctcatctcctaacgaggcacaaactgaa
cctttgttccttcagtggatatgcttgtgccttgggaaactatgggaggacttttcagag
gctcaactgttaggcctgcaggctgatgcgtctgctactcttgctcctctactttccgag
ccccaaccagaggtccgtgcggcagctgtttttgctctaggcactgccctagatatagga
tttgacacgtcaagagatggtcatggagatgaagattgtgatgatgatgataaagttaag
gctgaagccagtattataaaaaaccttttgaatgttgtttctgatggaagcccattggtg
cgagctgaagttgctgtggctctttcacgttttgcctttggccacaacaaacacctgaag
tcagttgctgctgcatattggaaaccccagtctggttctgtactcacttccttgccatct
ttcgcagtcaagggttctagtagtggctataccactcccactcactacatgcctcatgga
agtatagttccatctccaatcgcgccattattacgagttggaaatgacagccagcctgct
attcgcgatgggagagtatccacaagtagccctcttgctacctctgggataatgcatggg
tctcccctttccgatgattcatccctgcattctgattctggagcaccaaatgactctggc
agcaatggggttcttcatcattcaaggagaaaaccacttgataatgcactgtattcacaa
tgtgtattagctatgtgcaatctggcgaaggatccatctccacgtgttgcatcccttgga
aggcgtgtattatctgttattggtattgaacaagttgttgctaaatctgtcaagcctgct
ggtgcaagtgctcgtctaggtgaatcagcagcaagctccagcctggctggactagctcgt
tcgtcatcttggtttgaattgaatggaggagctcatttgccgctgacttttagaactcct
cctgttagtcctcctagaccaagctacttgactaaaatgcggagagtttgctccttggaa
tttagaccacatctgatcaattctccagattcagggctggcagatccacttttagcatca
gcgggaccatctggtgcttcagaacgtagtttacttcctcaatcaatgatctataattgg
agctgcggtcacttttcaaagccgcttcttactgcaacggatgatagtgaagatctgatt
gctagaagagaagaaagtgagaaattggcactcgatcatatagtaaaatgcaaacactca
tctgtgagtaaactgcataatcaaattgccagttgggataccaagttcgagacaggcacc
aaaactgctttgctgcaaccattctcacctgttgtgattgcttcagatgaaaatgaaagg
attagggtatggaattatgaggaagcaaccctgctcaacagtttcagtaaccatgattac
ccggacaaaggagtttccaagttgtgtcttgtaaatgaatttgacgagaacatgcttcta
gttgcatcaaatgatgggaatatacggatttggaaagattactcatcaaaaggacaacaa
aagttagttactgctttcgcttcgattcagggtcacaaacctggtgcccatggtgtgaac
gctgttgtggattggcaacagcagtcaggatatcttttttcttctggtgatatttcatct
atcatggcttgggatctggacaaagagcagcttgtcaataccatttccttgccacaagag
tcgagcatctcagcactggctgtttctcaagttcatggaggtcaatttgctgctggtttt
gtggatggttacgtcagattatatgatattcgtactcccgagatgcttgttactgaaacc
cggcctcacactcaacgagttgaaagagttgttggtattggcttccaacctggtcttgaa
ccagcaaagattgtgagtgcatcacaagcaggaaacatccagttcctagatatgagaagt
gctaaaaacacgtaccttacaatcgatgcccatagggggtcacttacagctttagccgtc
cacaggcacgcccctctcattgcaagtggctcggccaagcaactcatcaaggtcttcaat
ctggagggcgatccattaggcactattcggtactatcccactttcatggcccaaaagata
ggatcggttagctgcctgaccttccatccctatcaagtattacttgctgctggtgctgct
gattcttgtgtttccatatatgctgaagagatttcccctccaagatga
DBGET
integrated database retrieval system
