Salvia hispanica (chia): 125221659
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Entry
125221659 CDS
T09851
Name
(RefSeq) VPS35 endosomal protein sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125221659
Membrane trafficking [BR:
shis04131
]
Protein recycling
Others
Retriever complex
125221659
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps35
WHD_ROQ1
Motif
Other DBs
NCBI-GeneID:
125221659
NCBI-ProteinID:
XP_047979802
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Position
4:3477629..3488452
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AA seq
908 aa
AA seq
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MGLEFRRRDYRAEELVHSLQRARADTHPLSASSSPLQVEECESEKDDFCDPLRVSDGLVA
VSSSDVHREDVSTEATAPSQLKTTKGWISYKKMLMQRFPVSKTSPMSVASGVHAKGSKAI
EKSARDLHSGGLDDDKNFDDEDVKVISQQEHLSKLHGLKDEINQYWCAGDRVTSLRLSIK
AVRSLMDSSAIQIYPTLFVLATDIMDMLGDLVWNRIKEKAEITEENFNAGDICFDAKETC
NNWFSKVGSIRELLPRIYLELALLPCWRFLHDHPENILKRLVEMTRGIADPLASAYCRLY
LAQCSQRLSQHDTGFLIACINDLKLVLVRLTPARETVNGNLSGNSQLLLTLVEPAIEYII
KCLFKDLKKMEISKMLLALGLSSNLSILSKNHSCISVVLHHILKELPVEYICSNAVELLQ
LIEITDDRSFDQSLNFNLLGHRLCELVSQVSNVQLLIDKFIQVLSCCANLHAYLMLADAY
LDIILENHLDKLLNVILDGILERVRDERIGENELVILQSVFLKILTHFGDIKKILALNHF
IDILDMMHGSTRNSINMHILNMATRNGQIQDPIIIEVLLEVAQALYNGLDFSNMRKDEYQ
HPSRLISRFVYMVDHGIEVESHLRFLAQCRGAFSSINELQENLVHSSNNLAIRAMRNGNS
SISFVKSCLAFNEVTIPAIPANLRQLNLYIETAEVALLGGFVSHLDGLLNAAVNCLEMID
PVNVMQMAEDGDEAISLICKLCGLLVMVPGGVEPEVTYIPQRLLSLLNSQAWILPRMKAK
IFSAFVFLSAAQSQNQLLYHAVSGKVICNYQLFVGFPSDHQELLSLSRIALQGILNCVMQ
ESSKTCDLQERGKLALESCNCVASSFMVSDETLEACSKLVEIAKSCYSADDKFLQSTLKF
LNASQFHL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggggcttgaattcaggcgccgggactacagagccgaggagctggtccactcgctccag
agagcgcgtgctgatactcaccctctgtccgcttcttcttcacctctccaggtggaagaa
tgtgaaagtgaaaaggatgatttctgtgatccgcttagagttagtgatggattggtggca
gtttcttctagtgacgtacaccgtgaagatgttagtactgaggcaacagcgccttctcaa
ctgaaaacgacgaagggatggatctcttataagaaaatgttgatgcagcgctttcccgtg
tctaaaacatcaccaatgtcagtggcatctggtgtgcacgcaaagggtagcaaagcaatt
gagaaatcagcaagagatttgcattcaggagggttggatgatgacaaaaatttcgatgat
gaagatgttaaagtaatcagtcaacaggagcatttatcaaagttgcatggactgaaagat
gaaattaatcagtattggtgtgctggtgatcgtgtaacatcgttaaggctgtcaataaag
gctgtgaggtctctaatggactcatctgccatccagatttatccaactcttttcgtttta
gcaactgatataatggacatgcttggtgatcttgtgtggaaccgcatcaaggaaaaagca
gagatcactgaagaaaacttcaatgctggtgatatatgctttgatgccaaagagacctgc
aataactggttcagcaaagttggatctattcgggagctgcttcctcgcatctatttagaa
cttgcattgctgccttgttggcgcttccttcatgaccaccctgagaatatccttaaacgc
ttggtggagatgacgaggggcattgctgatcctctggcatcggcttattgtcgcctatac
ctggctcaatgctctcaaagattatcccaacatgatacaggttttcttatcgcgtgcata
aatgacctgaaactggtactcgttcgcctcacaccagcaagagaaaccgtgaatgggaat
ctttctggaaatagtcaattactgcttactctggttgaacctgctatagagtatatcata
aaatgtttattcaaggatctaaaaaagatggaaattagtaaaatgcttcttgcacttgga
ttgtcgagcaatctgtcaatcttgtctaaaaatcattcatgcatatcggtcgtccttcat
catatactaaaggaacttccagttgaatatatttgttctaatgccgtggagttgctacaa
cttatagagatcactgatgataggtcttttgatcagtcgttaaatttcaatttacttgga
cataggctatgtgaattggtatctcaagtgagtaacgtccaattattgatcgataaattt
atccaggttctatcttgttgtgcaaatcttcatgcatacttgatgcttgcagatgcttat
ttggatataatcttggagaaccatttggacaagctcctaaatgtaatactggatggaata
ttggagcgtgtgagggatgagaggattggtgaaaacgagttggttatactgcaatcagtt
ttcttgaaaattcttactcattttggtgacataaagaaaatattggcattgaaccatttt
attgacatcttagatatgatgcatgggagcacgagaaactctatcaatatgcacattctt
aatatggcaactaggaatggtcaaattcaagacccgatcatcattgaggtgctacttgaa
gttgctcaggcattatacaatggcttagacttctcaaatatgagaaaggatgagtatcaa
catccatctcgtctgatttctcgttttgtttatatggttgaccatgggatagaagtggag
agccatttgaggttccttgcccaatgtcgtggagcattttctagcattaatgaactccag
gagaatcttgttcattccagcaacaacttagccattagagcaatgagaaatggaaacagt
agcataagttttgtcaaatcatgcctggcattcaatgaagtaacaatacctgctattccg
gctaacttaaggcagttgaacttatatattgaaacagcggaggtagcgttgctgggtgga
tttgtttctcatctggatgggcttctaaatgcagcagtcaattgcttggaaatgattgat
ccagtcaatgttatgcagatggcggaagatggcgatgaagccatttcattaatatgtaag
ttatgcggcctgttggtgatggtcccaggtggtgttgaaccagaagtaacctacattccc
cagcgtttgctgtctctccttaactcccaagcatggatattgccgagaatgaaggccaag
atattctctgcatttgttttcttgtctgcagcacaatcccagaatcaattgctgtaccat
gctgtgagtggaaaggttatttgtaactaccaactatttgttggattcccttctgatcat
caagaactactgtctttgtcacgtattgctcttcagggcattctaaattgtgtgatgcaa
gagtcttctaagacttgcgacttgcaggagcgaggaaaattggctctcgaaagttgtaac
tgtgtagcttcatcctttatggtgtctgatgaaacattagaagcatgctccaagttggtg
gaaatagccaagtcctgctacagtgcagacgacaagtttctacaatctacattgaagttt
ttaaatgcttcccagtttcacttgtag
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