Salvia hispanica (chia): 125221766
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Entry
125221766 CDS
T09851
Name
(RefSeq) protein GIGANTEA-like isoform X1
KO
K12124
GIGANTEA
Organism
shis
Salvia hispanica (chia)
Pathway
shis04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
125221766
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NCBI-GeneID:
125221766
NCBI-ProteinID:
XP_047979963
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Position
4:21558943..21563156
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AA seq
1050 aa
AA seq
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MLVCLLCSDKEVCLHMATSNEKWIDNVQFSSLFSPPPNDAQQHHAQVSSYVEMFISEQFH
HDLEEAIRGRYPCNEKTLFDDVLAALVVHHPDQGSGVVVPIISCIIDGLLEYHSTNPPFP
SFISLVRPDSNVDSEELVLAYGEILRILTHYNRPVYRRHTKGSSSSNEASSSSWSRPLSP
WITDMLLQAPLGIRTHFFRWCGGVAGTYAPTQLKQASTGKHHVLMTSTPIWAVANGTAVI
LSVCDEEVARYQTATLTEAAVQAVLLPPETAPKDEHPIADLPALEPYARLFHRYYTSSSP
SVTQRLLLRLLEAPPSWAPYALEAAVQLVELLRAADHQASDNKLPRNWMCLYFLHAIGIA
MSMEGQIAADAAAALLFRILSQPSLLFPLQSQAGDAHHLTLPEPDKPRELPTAEEIASML
CANGLEVERRICMIWEAAYGLIPLTSSSTDLPIIVAATSLQRPILSWNLYIPLLKVLEHL
PRGSPSQSSLMKIFVATVKAILSRTFPPESCKEQIQRTRNAYKTLVVCELRTIVHSLFLG
SCASVELTSRLLFAVLTVCVSHEEELGGSRRRGAEEGEKLASKRGPIAAFDSYVVAAVCA
LSCELHTYTLISYQLDAGAKCRSIDHTRRILAVLEALMSSELSSIGTSWSYTSDDIVVTV
MVAAHVYDLFRRSKACKKALSLMMRRKWDKEIRSRASSLFKLIDVQCKTVASIVDRAGSL
EDWLVHGMAPPFQGKKRKMHAGCFHFGSSQPSSLLYENVAGSEALSVCEKAESNFSTVEG
KMGFNCSRQALRSVLAEKQQLCFLVVSLLWHALIVSPEIHPRAESSSMQQGWRKVVDALC
NVVSASPAKAAIAVVVQASSNLRLWTVEDDDHGKKARRINERVVKVIAELMNSHENIQSL
MIMASSSELLLRATDGIMIDEGASTLAQLEVLEAAARAVHPMLRWGEPGLAVAEGVVDVL
KSYNVQCRLDATARCISHPRARVRSLSNSVLHALVHVGSRCKHSATGIVGLKDAVDKCLE
LEARRRVEAGLPVNFVQAIAKELSCCTISS
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgtgcttgctttgttcagataaagaggtgtgtttacatatggcaacttcaaat
gagaagtggattgacaatgtccagttttcttccttgttctccccacctccaaatgatgca
cagcaacaccatgctcaagttagtagctatgtggagatgttcatctcagaacaattccat
catgatttagaggaggcgattcgaggccggtatccatgtaatgagaaaacactgtttgat
gatgttttagcagcattggttgttcaccacccagaccaaggctctggtgtcgttgtcccc
atcatatcgtgcatcatcgatggcttgctcgaataccacagcaccaatcctcccttccct
tctttcatctccctggttcgccctgacagcaatgtggattccgaggagttggtccttgca
tacggggagatactacgaatcttgactcattacaaccggccagtttacaggagacacacc
aagggatcatcttcatctaatgaagccagttctagttcgtggtcgaggccattgtcacct
tggatcactgacatgttgctccaagcacctcttggcatccggactcatttcttccgctgg
tgtggaggcgtggccgggacatacgcacctacacagctcaaacaggcttcaactgggaag
catcatgtgctcatgacatccactccgatatgggcagtggctaacggcactgcagttata
ctcagtgtatgcgacgaagaagttgctcgttaccagactgctacgctgacagaagctgct
gtgcaagcagtcttgcttccacccgaaacagcccctaaggacgagcatcccatagccgac
ctaccagctctcgagccctacgcacgcctctttcatcgatactacacgagttcaagcccg
agcgtgacccagaggctacttctgaggctgcttgaagctccaccatcatgggctccttat
gcgctcgaagcagctgtgcaactagtggaactccttagagcagcagaccaccaagcctca
gacaacaagcttccgaggaattggatgtgcctgtatttccttcatgcaatcggaattgca
atgtccatggaaggtcaaattgctgcggacgctgctgctgctttactgtttcggatactt
tcccaaccttctttactctttcctctgcaaagccaagctggtgatgctcatcatctaaca
ttaccagaaccagacaagccaagagagttacctacagcagaagagattgcatcgatgctt
tgtgcgaacggccttgaggtggagcggagaatatgcatgatatgggaagctgcttatggt
ttgatccctctaacttcctcctccacggatcttcccataatcgtggctgcgacttctctg
cagcggcctatactatcatggaacttgtacattccccttctcaaagtactcgagcatcta
cctcgtggaagtccctctcagagctctctgatgaagatattcgttgctactgtcaaagca
atcctgagtagaacattcccgcccgagtcatgtaaagagcagattcagagaacaagaaat
gcgtacaagactctagtcgtttgtgagcttcgaacaatagtccattctctgttcttgggg
tcgtgtgcttctgtggagctcacttcccgccttctctttgctgtgctgactgtctgcgtg
agtcatgaagaagagctcggtggcagcaggagacgtggagctgaggaaggcgaaaaattg
gcaagtaaaagggggcctatagcagcatttgattcatatgttgttgctgctgtctgcgct
ctctcgtgtgagctacatacatacactctcatttcgtaccagttagacgccggtgccaaa
tgtaggtccattgatcacacgcgacgaatactagcagttttggaagcactcatgtcttcg
gagctctctagtattggcacatcatggagctatacctcagatgatatagtggtcactgtg
atggttgcagctcacgtttacgatctatttagacgttccaaggcctgcaagaaggctctt
tcgctcatgatgaggcgcaagtgggacaaggagattcgttcccgagcatcttccctcttc
aaactgattgatgtccaatgtaaaactgttgcatccatagtcgacagagcagggtccctg
gaggactggctagtgcacgggatggctcccccttttcaggggaagaaacgcaagatgcat
gctggctgttttcactttggatccagccagccatcttcgttgttatacgaaaatgtagct
ggttctgaggctttgagcgtatgcgagaaggctgaatccaatttttcgacagtggagggg
aagatgggctttaactgcagcaggcaggctcttagatccgtcctcgcggagaaacaacaa
ttgtgcttcttggtggtttctttgctctggcacgcgttgattgtatcacctgaaatccat
ccgagagctgagagttcgtctatgcagcaagggtggaggaaggtggtggatgctctatgc
aacgtcgtctcagcatcgccagcaaaagctgcaatcgctgttgttgttcaggcaagcagt
aacttaaggctttggactgttgaagacgacgatcatggaaaaaaggcacggagaatcaac
gagagagtagtgaaagtgattgctgaactgatgaacagccatgagaatatacagtcattg
atgatcatggctagttcgtccgagcttctcctccgagcaactgatgggatcatgatcgat
gaaggagcatccacattggctcaacttgaggtgctggaagcagcggctagagcagttcac
ccgatgctcagatggggggagcccggattggcagtggcggagggtgttgtagacgtattg
aagagttataatgtgcagtgccgccttgatgcaactgctcgttgcatttctcatccgagg
gctcgtgttcgatccctcagcaactctgtgctccacgcactggtgcacgttggctcaagg
tgcaaacactcagctacaggcatcgttgggttgaaagacgccgtggacaagtgtttggag
ttggaggctcgtaggcgggtcgaggcaggcttgccggtgaacttcgtccaagccattgca
aaggaattaagctgttgcaccatatcctcttga
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