Salvia hispanica (chia): 125221883
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Entry
125221883 CDS
T09851
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1-like
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125221883
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shis04147
]
125221883
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
125221883
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125221883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_EZ
HEAT_EF3_N
HEAT_2
HEAT
HEAT_ECM29
TOR1L1_N
Cnd1
GNC1_N
mTOR_dom
MMS19_N
PPP2R1A-like_HEAT
Telomere_reg-2
HEAT_DAAF5
Rif1_N
Dopey_N
Motif
Other DBs
NCBI-GeneID:
125221883
NCBI-ProteinID:
XP_047980152
LinkDB
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Position
4:16965854..16980132
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AA seq
1218 aa
AA seq
DB search
MANLALTGILEKMTGKDKDYRYMATSDLLNELNKEGFKLDVDLEAKLSNIVIQQLDDAAG
DVSGLAVKCLVPLVKKIHEQQVLEMTNKLCDKLLNGKEQNRDIASIAVKTIVAEVPNATV
AQSVLVSISPKLIRGIVTQAMGTEIKCECLDILCDVLHKYGNLMASDHEVLLSALLPQLN
TNQASVRKKAVSCIASLASSLSDDLLAKATVEIILLLKNQTTKSELTRTDIQMIGALSRA
VGYRFGPHLGDAVPILINYCNNASENDEELREYSLQALESFLLRCPRDISSYCDQILHLT
LEFLSHDPNFTDNMEEDTDDESYVEEEDDDSANEYTDDEDVSWKVRRAAAKCLAALIVSR
PEMLSRLYEEACPKLIDRFKEREENVKMDIFNTFIELLRQTGNVTKGQTDFDESSPRYLL
KQEVAKIVRSVNKQLREKSIKTKVGAFSVLKELVIVLPDCLAEHIGSLTPGIEKALCDKS
STSNLKIEALVFTRLVLASHAPPVFHPYIKAISAPIISSVGERYYKVTAEALRVCGELVR
VVRPDIEVFDFDFKPYVHPIYAAIMSRLTNQDQDQEVKECAISCMGLVVSTFGDHLGAEL
PSCLPVLVDRMGNEITRLTAVKAFAVIAASPLHIDLSCVLEHVISELTAFLRKANRALRQ
ATLGTLNTLIVGYGDKIGSAAYEVIVAELSTLISDSDLHMAALALELCCTLMADKRSGPT
VGLTVRNKVLPQALTLIRSSLLQGQALLALRNFFTALVYSANTSFDVLLDSLLSAAKPSA
QAGAVAKQALFSIAQCVAVLCLSAGDKKCSSTVNMLTDILKADSSTNSAKQHLSLLCLGE
IGRRKDLSSHDHIENIVIESFQSPFEEIKSAASYALGNIAVGNLPKYLPFILDKIDNQQK
KQYLLLHSLKEVIVRQSVDKAEFDDSSVDKITKLLFNHCESDEEGVRNVVAECLGKIALI
EPGKLVPALKERTSSPAAFTRATVVIAVKYSIVERQEKIDEILYPEISTFLMLIKDQDRH
VRRAAVLALSTAAHNKPNLIKSLLPELLPLLYDQTVIKKELIRTVDLGPFKHTVDDGLEL
RKAAFECVDTLLESCLDQVNPSSFLVPYLLSGLDDHYDVKMPCHLILSKLADKCPSAVLA
VLDSLVDPLQKTINFRPKQDAVKQEVDRNEDMIRSALRAIASLNRISGGDCSHKFKNLMN
EIGKSKTLSEKYSSIRNE
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacttagccctaactggaatattggaaaagatgactggtaaggataaggactac
agatacatggcaacttctgatttgcttaacgagttgaacaaagaagggtttaaactcgat
gttgatctcgaagcgaagctttctaacattgtcattcagcaactcgatgatgcagcaggc
gatgtttccggattagctgtcaagtgccttgttcccttggtgaaaaaaatccacgagcag
caggttcttgagatgactaataagctttgtgataaattgctcaatgggaaagagcaaaat
cgtgacattgccagcattgctgttaagacaattgttgctgaagttcctaatgcaactgtt
gcacaatctgttcttgtatccatttctcccaagttgatacgaggaatagtcacacaggcg
atgggcacagaaatcaaatgtgaatgccttgatattttgtgtgatgttttacacaaatat
ggcaatctaatggcatccgatcatgaggtgctgctgagtgcacttttgccccagttgaac
accaatcaggccagtgtgagaaagaaggctgtttcatgcattgcatcactggcttcaagc
ttgtcggatgatttgctggcaaaggctacagttgaaatcatcctgcttttgaaaaaccaa
acaacaaaatcagaacttactcgtacagatattcaaatgattggggcgttgagccgtgct
gttggctatcgttttggtccacacctcggagacgctgttcctattctaattaactactgt
aataatgcatcagagaatgacgaagagcttcgtgagtatagcttgcaggcattagagagt
tttctacttaggtgtcccagggatatctcttcctactgtgaccaaatcttacatcttact
ttggaatttctgagtcatgatccaaattttactgataacatggaagaagacacagatgac
gagagttatgtggaggaggaagatgatgatagtgctaatgagtacactgatgatgaagat
gtaagctggaaagtgcggagagctgctgccaaatgtttagctgctttaattgtttctcgg
cctgagatgctttcaagactatatgaagaggcttgtccaaagttgattgataggtttaaa
gaaagggaagagaatgtcaagatggatatcttcaatacgttcattgaattactaagacaa
acaggaaatgttacaaaaggccagacagattttgatgaatcaagtcctagatatctattg
aagcaagaggtggcaaagattgttcgatctgtaaataaacagttacgcgagaaatctatc
aagacaaaggttggagctttctctgttttgaaagaactggtgatagttttgcctgattgc
cttgcagaacatattggatctctgacgcctggaattgagaaagcactttgtgacaaatct
tctacctcaaatttaaagattgaagctcttgtttttactagattagtgttggcctcacat
gctcctcctgtttttcatccgtacatcaaggcaatatctgctccaatcatatcttctgtt
ggtgaacggtattataaagttacagcagaggcattaagagtatgtggagaacttgttcgt
gtcgtgcgaccagatattgaggtatttgattttgattttaaaccctatgtccatcctata
tatgctgctatcatgtcacgtttgaccaatcaagatcaggatcaggaagtgaaagaatgt
gcaatttcttgcatgggacttgtggtttctacatttggtgatcatctcggggcagagcta
ccttcatgcctccctgtgcttgttgatcgaatgggaaatgagattactcgtcttacagct
gtcaaggcatttgctgtcattgctgcttctcctctgcacattgacctatcgtgtgtttta
gagcatgtaatttctgagttgactgcatttctaagaaaggccaatcgagcgctaagacag
gctacacttgggacactgaacacacttattgtaggatatggcgacaaaattggttcagct
gcttatgaagtcattgttgctgagctttcaactctgatcagtgactcagacttgcatatg
gctgctcttgcattggaattgtgttgcacattaatggctgacaaaagatctggtccgact
gtcggtctgactgtccgaaataaagttctgccacaagctctgactttaattagaagctct
ctgctccagggccaggcccttctggcactacgaaatttcttcactgcgctggtttactcg
gccaacacaagctttgatgtactgcttgattctcttctttctgctgccaaaccatctgcc
caggctggtgctgttgcgaaacaggctttattctcaattgctcaatgtgtggctgttctc
tgtctatctgctggcgacaaaaagtgttcctctacagttaacatgcttacagacatctta
aaagctgatagcagtaccaactctgccaagcaacatctctccttgctgtgcttgggagaa
attggcaggagaaaagatttaagttctcatgaccacatagagaacattgttattgagtct
ttccagtcgccatttgaagaaataaaatccgctgcatcttatgccctgggaaacattgca
gtcgggaatctgcctaaatatttgcctttcatcttggacaaaattgataatcagcaaaag
aagcagtatctgttgctccattctctgaaggaggtcatcgtgagacaatctgtagataaa
gctgaatttgatgattccagtgttgacaagatcactaaattgctatttaaccactgtgaa
agtgacgaagagggtgttcgtaatgtggtggctgagtgcctggggaaaattgctcttatt
gagcctggtaaacttgttcctgctcttaaggagaggacatccagtcctgctgcattcacc
cgggcaactgttgttatagcagtgaaatattctatagttgagcggcaggagaaaattgac
gagattctgtacccagagatttctactttcttgatgcttatcaaggatcaagaccggcat
gtgagacgtgctgctgttttggccctgagtactgctgctcataataaaccaaacctgata
aagtcgctgttaccagagctattgccactcctctatgatcaaacagtaataaagaaagaa
ttgatccggacagtagatcttggccctttcaagcacacagtagatgatgggcttgaattg
aggaaagctgcttttgaatgtgtggacactttgttagaaagttgccttgatcaagtcaac
ccatcttcgtttttagtaccatacctcttatctggtttagatgatcattatgatgttaaa
atgccttgccatcttatcctttcaaagttggctgataagtgcccatctgctgttttggca
gtattggattcgttggtggatcctctccagaagaccatcaattttaggcccaagcaagat
gcggtcaaacaagaagtagatcgtaatgaagacatgatccgaagtgcccttcgagcgatc
gcatctttaaaccgaataagtggaggagattgtagtcacaagtttaagaatcttatgaat
gaaattggcaagtccaagacattatctgagaaatactcatccatccggaatgaatga
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