Salvia hispanica (chia): 125221921
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Entry
125221921 CDS
T09851
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shis01009
]
125221921
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125221921
Enzymes [BR:
shis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125221921
Protein phosphatases and associated proteins [BR:
shis01009
]
HAD phosphatases
Fcp/Scp phosphatases
125221921
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125221921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DSRM_2
Motif
Other DBs
NCBI-GeneID:
125221921
NCBI-ProteinID:
XP_047980214
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All DBs
Position
4:complement(39048891..39054761)
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AA seq
783 aa
AA seq
DB search
MSRLGFKSVVYHGDVYLGELEAVIVKAGNFQFPNNEIRIHHITPNSDRCHPLSVLQTISY
ASVVCKLEPCADANPNPDEPSPLINLHASCFYELKTAVVLVGTEEIHLVAMPSTQKKFPC
FWCYSVPFGLYDACLWMLNTRCLAIVFDLDETLIVANTMKSFEDRIDALVGWIARETDPI
RESGMTAEMKRYVEDRALLKQYAEIDSVMDGGKVYKVQHEEVPILSDGIRRVVRPVVRLP
EKNIVLTRINPENRDTSVLVRLRPAWEDLKTYLTAKGRKRFEVYVCTMAERDYALEMWRL
LDPEAHLISSKQLLDRVVCVKSGARKSLLTVFQNGTCHPKMAMVIDDRLKVWEDKDQPRV
HVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGGFFKEFDENVLTRISEIFYENELVN
LPCAPDVSNYLISEDANLIQNGNMNGPVADGMNGPEVAQRLHPLFPFHVQDEKNGTHAVS
LSFANNVELKSESSKIPVVSIANAAGPVTRALPSEKPSLLGDPFRRDSRFPISTEPPLLS
RFPWQAPLLQPQAVRIVEDDTSGGNFSNQTPGIFSEYERGLQNSVSHGTSSSVPLELSHV
NPMKAEEANSVFDSQKQGPLLPNQFADYAKSNNQPSTTGKELKSEGDKMNLLPSFSISVL
QEIGRRCRSKVEFRPVVGTGNDLQFSVEVFFTGEKIGVGMGKTRKDAQQQAADNALRSLA
DNYASYIAPHCTTVDSDFDRPILEKENGFLWDTAKPGPEELPVSNGYLKQNNDMEKCDNG
SHG
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgattagggtttaaatcagtggtttatcatggagatgtgtatctaggggaactg
gaagcagttattgtgaaggccgggaatttccaattccccaataatgagattcggattcac
cacatcacgcctaacagcgacagatgccatcccctctctgttctacagacgatttcctat
gcctctgttgtctgcaaacttgagccctgcgctgatgccaatccgaatcccgatgagcct
tctcctctcatcaatctccacgcttcgtgcttctacgaactcaagacggcagttgtattg
gttggtactgaggaaattcatttagtggcaatgcctagcacgcagaagaagtttccgtgt
ttttggtgctactcagtgccatttggtttgtatgatgcttgcttatggatgttgaatacc
cgatgtttagctattgtgttcgatctagacgaaactcttattgttgccaacactatgaag
tcatttgaggatagaatcgatgctttggtgggttggattgcacgtgagacggaccctatt
cgggaatcagggatgacagcagagatgaagagatacgttgaggatcgtgcattgctcaag
cagtatgcagagattgacagcgttatggatggtgggaaagtatataaggtgcaacatgag
gaagtccctattctatctgatgggattcgtcgtgttgttcggcctgtagtaaggttgcct
gagaaaaatattgttcttacacgcattaatcctgagaaccgtgataccagtgtgctggtc
aggttacgacctgcttgggaagatttaaaaacttacttaactgcaaaaggccggaaaaga
tttgaagtttatgtttgcacaatggctgagagagattatgccctggaaatgtggcgcttg
cttgatccagaagcacacttaattagctcaaagcagctactggaccgtgttgtatgtgtc
aaatcaggtgctaggaaatctttgctcactgtcttccagaatggcacctgtcatccaaag
atggcgatggttatagatgaccggttgaaagtgtgggaagacaaggatcagcctcgtgtc
catgtagttcctgcattcactccatattatgctccacaagcggagactgcaaatgctgtt
cctgtcctttgcgtagcaaggaatgtagcatgcaatgttagaggtggttttttcaaggag
tttgatgaaaatgtcttaacaagaatatcggaaattttctacgaaaatgagcttgtcaac
ttaccttgtgcaccagatgtgagcaactatttgatttcagaggatgctaatcttatacaa
aatgggaatatgaatggtccagttgctgatggaatgaatggacctgaagttgcacaaaga
ttgcatcctctgtttccctttcatgtccaggatgagaagaatggcacccatgctgtttcc
ctttcctttgctaataacgttgagttaaagtctgaaagctctaagattcctgtagtatct
attgccaatgctgctggtccagttaccagggctttaccttctgaaaaacccagtttgctt
ggagatccatttagaagagatagcaggtttccaatttcaactgaaccacctctattgtct
aggtttccttggcaggcaccactcctgcagccacaagctgttcggatagttgaagatgat
actagtggagggaatttcagtaaccagactccaggaatattttcagaatatgaacgaggt
cttcagaactcagtcagtcatggtacttcatcatcagttcctctggaactttcgcatgta
aatccaatgaaagccgaagaggctaactcagtctttgacagccagaaacagggcccctta
ttaccaaatcagtttgcagattatgctaaatcaaacaatcaaccttcaaccactggtaaa
gagcttaagagtgaaggtgataaaatgaacctgttgccatccttttctattagcgtgctc
caagagattggaagaagatgtagatcaaaggttgaattcagacctgttgtaggtactgga
aatgatttgcagttctcagttgaggtattctttactggtgagaaaattggtgttggaatg
ggaaagacgagaaaagatgcacagcaacaggctgcagacaatgctcttcggagcttagct
gataattatgcatcttatattgcacctcactgtaccactgtggatagtgattttgataga
cccattttagaaaaggaaaatgggtttctttgggacactgccaagcctggacctgaagaa
ctgccagttagtaatggatatttgaaacaaaataatgacatggagaaatgtgacaatgga
tcccatggctga
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