Salvia hispanica (chia): 125221930
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Entry
125221930 CDS
T09851
Name
(RefSeq) cullin-1
KO
K03347
cullin 1
Organism
shis
Salvia hispanica (chia)
Pathway
shis04120
Ubiquitin mediated proteolysis
shis04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125221930
04120 Ubiquitin mediated proteolysis
125221930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125221930
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
125221930
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
DUF5442
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
125221930
NCBI-ProteinID:
XP_047980229
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Position
4:complement(55152550..55158701)
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AA seq
744 aa
AA seq
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MTMNQRTTIDLEQGWDFMQNGITKLKRILEGLPEPQFSSEDYIMLYTTIYNMCTQKPPHD
YSQQLYDKYKEAFQEYISTTVLPSLKEKHDEFMLRELVQRWSNHKIMVRWLSRFFHYLDR
YFVARRSLPILREVGLSCFRDLVYVELSGKVKDAVISLIDQEREGEQIDRALLKNVLDIF
VEIGMGQMEYYENDFEAALLNDTAAYYSRKASNWILDDSCPDYMLKAEECLKREKDRVAH
YLHSSSETKLLEKVQHELLSVYATQLLEKEHSGCHALLRDDKVDDLSRMYRLFSKIPRGL
EPVAQIFKQHVTAEGTALVKQAEDAASTKKAEKRDVIGLQEQVFVRKIIELHDKFMAYVN
DCFLNHTLFHKALKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLE
KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGM
VTDLTLARENQASFEEYLSNTPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEV
FKEFYQTKTKHRKLTWIYSLGTCNINGKFEQKTIELIVTTYQAAALLLFNASDRLSYQEI
MTQLNLSDDDVIRLLHSLSCARYKILTKEPSTKTIAPTDIFEFNSKFTDKMRRIKIPLPP
VDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGYQQLVMECVEQLGRMFKPDVKAIKKR
IEDLITRDYLERDKENPNLFKYLA
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgactatgaaccagcgtaccacgattgatttagaacaaggatgggattttatgcaaaac
gggataacgaaattgaaaagaattcttgaagggttgcctgagccccagttcagctcagag
gactacataatgctctacacgacaatctacaacatgtgcactcaaaagcccccacatgat
tattctcaacaattatatgacaaatacaaggaggctttccaagagtacatttcaacgaca
gttttgccttctttaaaggaaaagcatgatgagttcatgctaagggagcttgtacaaagg
tggtcaaatcataagatcatggtgcgatggctttcaaggttcttccactatcttgatagg
tacttcgttgccagaaggtcacttccaatacttagggaagttggtctgtcatgcttccgg
gacctggtatatgtggagttatctgggaaagtcaaagatgctgttatttctctgatcgat
caagagcgagaaggggagcaaatagatcgagctttgttgaagaatgtattggacatattt
gttgagataggaatggggcagatggaatattatgaaaatgactttgaagcagcgctgcta
aatgacacagcagcttactattctcgaaaggcttcaaattggatcttagatgattcatgt
cctgattatatgctaaaggctgaggagtgtttgaaacgagaaaaggacagggttgctcat
tatcttcattcaagtagtgagacaaagttgcttgagaaagtacaacacgaactgctatct
gtgtacgccacccagctactagagaaggagcactcaggttgtcatgctttactgagggat
gacaaggttgatgatttgtcaaggatgtataggctattttcaaaaatacctcgcggttta
gagcctgttgcacagatttttaagcagcatgttactgctgaaggcacagctttggtcaaa
caagccgaagatgctgcaagtactaagaaggcagaaaagagagatgttattggattgcag
gagcaggtatttgtgagaaaaataattgagctccatgacaaattcatggcatatgtgaat
gattgtttcctaaatcacacgcttttccacaaggctctcaaggaggcctttgaagttttc
tgcaataagggagttgctggaagttctagcgcggaacttcttgccacattttgtgataac
atactcaaaaagggtggaagtgaaaaattgagtgatgaagctatagaagaaactctggag
aaggttgtaaaactgcttgcttacattagcgataaggatttatttgctgaattttatcgg
aaaaagcttgcacgacgtctgttatttgataaaagtgctaacgatgagcatgagagaagc
atcctaacaaagttgaagcagcaatgtggtggccaatttacctcaaaaatggagggaatg
gtaacggatttaaccctagctagagaaaatcaagccagctttgaggagtatctcagcaat
acaccaaatgcaaatccagggattgacttgacggtgactgttctgacaacgggtttctgg
cctagctacaagtcctttgatcttaatcttccagctgagatggttaaatgtgttgaagtg
ttcaaagagttttatcaaacaaaaacaaagcataggaaacttacatggatatattctttg
ggcacatgtaacattaatggaaaattcgaacaaaaaacaatagagctgattgtgactact
tatcaggctgctgcgctgctactgtttaatgcatcggatagattaagctatcaagaaatt
atgactcagttgaatctatctgatgacgatgtcatcagactgcttcattcactttcatgc
gctaggtacaagattttgacgaaggagcctagcaccaaaaccattgctccaactgatatc
tttgaatttaattccaagttcacggacaaaatgcgaaggatcaagatccctcttcctcct
gtggatgagaaaaagaaggtgattgaggatgttgataaggacagacgttatgcaatagat
gcctcaattgttcgtatcatgaagagtaggaaggtcttgggataccagcagctagttatg
gagtgtgttgagcaattgggccgaatgtttaagccggatgtcaaagcaatcaagaagagg
attgaggatctgatcactcgtgactaccttgaacgggacaaggaaaatcccaacttgttc
aagtacttggcgtaa
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