Salvia hispanica (chia): 125221948
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Entry
125221948 CDS
T09851
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 5B-like
KO
K03243
translation initiation factor 5B
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
shis03012
]
125221948
Translation factors [BR:
shis03012
]
Eukaryotic type
Initiation factors
eIF-5
125221948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
125221948
NCBI-ProteinID:
XP_047980255
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All DBs
Position
4:complement(28566031..28570530)
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AA seq
984 aa
AA seq
DB search
MSGYNSGFVASAFGLLGEDDDDDDVERGEKDDDISAFELVDGEEECGDKDGDDVGISFTG
KKKKSKKASFGSTLLEEESDAPSDIVECGGDCKSKKEDVASKNKEKKKKKKKGGKNLQEE
EEDLDKILAELGVPLPPAEQEKAEEEGHVEAVTSKKKKKEGKEXEEKASAAEEKPEDTNS
KVSGKKVSKHVREMQERLAKLKEAEERKKREEEEKLRKEEEERLRQEELDRLAEEKKRLK
KEREKEKLLKKRQEGKLLTGKHKEEARRLEAMRNQILANAKLELPTGEPARRPLYQKKKS
KPXKNQSNRESTDAKEIREDVVLELASVEAENVEVTDVVDNNGVDDDEEDDEEWDAKRWD
EADLMLPGKSVFDDEEVDSESKPLPKKDMPIGLVEKVMPPKLENVDVQNNSVAEKKKTEV
VDDQPVRNGQNLRSPICCIMGHVDAGKTMLLDFIRGTHVQEGEAGGITQQIGATYFPAEN
IRERTKHLKADAKLNVPGLLVIDTPGHESFTKLRSRGSGLCDIAILIVDLMHGLQPQTIE
SLNLLKSGNTDFVIALNKVHRLYGWKTCRNAPIGKAIKQQSKDVMIEFNRRLTEIITQFK
ELGLNTELYYKNKEMGETYNIVPTSAKSGEGIPDLLLLLVQWAQKTMIKRLTYSEEVQCT
ILEVKVDEGHGTTIDIVLVNGVLREGDQIVVGGMQGPIVTSIRALLTPHPMTELRVKGTY
LHHKEIKAAQCIKIAAQGLEHAIAGASLYVVGPNDYIEDIKESSMAYVNKVMSRIGKSGK
GVCVQASTLGSLEALLDFLETPAVNIPVSTISIGPVHKRDVKKASVMLEKKKEYGTILAF
DVKVATDAQEHADELGVKIFTADIIYHLFDQFKAHIDSFKLEKKRDAAKDAVFPCVLKII
PDCVFNTKDPIILGVDVAEGIAKIIGSNPEEQQKMLGRHFEVEDLLKSKISRHSIDVLKA
YYKDEVSPEDVRLLTDLKKEFGIP
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatataacagtggttttgttgcttcagcttttgggttgctaggagaagatgat
gatgatgatgatgttgaaagaggggaaaaagatgatgacatttccgcatttgaattggtt
gatggagaggaagagtgcggagataaagatggagatgatgttggtattagttttactggt
aaaaagaagaagtcgaagaaggcatcgttcggttccacattgctcgaagaagaaagcgat
gcaccatctgatattgttgaatgtggtggtgattgtaagagtaaaaaggaagatgtagct
tcgaaaaacaaagagaagaagaagaagaagaagaaaggtgggaaaaatctacaagaggaa
gaagaggacctggacaagatcctggctgagcttggcgtgcctcttccacctgccgaacaa
gagaaggctgaagaggaggggcatgtggaggctgtaacatcaaagaagaagaaaaaggag
ggcaaagagtaagaggagaaggcgtctgctgcggaagaaaaaccggaagatacaaatagt
aaagtaagtgggaagaaagtctcgaagcatgtgagggagatgcaggagaggcttgctaaa
ctgaaggaggctgaagagaggaagaaacgcgaagaagaagagaaattgagaaaagaagaa
gaggagaggcttagacaagaagaactggatagattggctgaagagaaaaagcgtttaaag
aaggagagggagaaggagaagctcctcaagaaaaggcaagaagggaagcttcttactggg
aagcacaaggaagaggctaggaggttggaggcaatgaggaatcaaatattagctaatgcg
aaattggaactacccactggagagcctgccaggagacctctgtaccagaagaaaaaatca
aagcccnncaaaaaccaatctaatcgggagagcactgatgcaaaagagatccgagaagat
gttgtgttggagttggcttctgttgaagcagagaatgttgaggtaactgatgttgtcgac
aacaatggagttgatgatgatgaagaagatgatgaagagtgggatgccaaacgttgggat
gaagctgacttgatgttaccaggaaaaagtgtatttgatgatgaagaagttgattcagaa
tctaagcccttgcctaagaaggatatgccaattggcttggttgagaaagtgatgccacca
aaattggagaatgtggatgttcaaaacaactctgtggcagagaagaagaaaacagaagtt
gttgatgatcagcctgttcgaaatggacaaaaccttcggtctcctatatgttgtattatg
ggccatgtcgatgctggaaagacgatgttgcttgattttattagaggtacacacgtccaa
gaaggcgaggcgggtgggattacacagcaaattggagcaacctatttccctgctgagaat
ataagggagaggacaaagcacctgaaagctgatgcaaagctcaatgtccccggtttgtta
gtgatcgatacccccggacacgaatctttcaccaagctgcgttctagaggatcaggacta
tgtgatattgcaattttgattgttgatctaatgcatggtttgcagccacagacaattgag
tcactcaatcttttgaaaagtggaaatacagactttgtaattgccttgaacaaagttcac
agactttatgggtggaagacttgccgtaatgcaccaataggaaaggcaatcaaacaacag
tcaaaagatgtcatgattgaatttaacaggaggctaactgagattattactcagtttaag
gagctgggcctcaataccgagttgtattataagaacaaagaaatgggggaaacatataac
attgtaccaacaagtgccaaaagtggagagggcatcccagatttactgttgctgctagtc
caatgggctcagaagacgatgattaaaaggcttacatatagcgaggaagtgcagtgtact
attttggaggtcaaagtggatgaaggacatgggacaacaatcgacattgtattagtgaat
ggcgtgcttcgtgaaggagatcaaatagttgttggtggcatgcagggaccaatcgttacc
tcaattagagcattgctaacaccccaccccatgacagagctcagagtcaagggaacatat
ttgcatcacaaagaaatcaaggctgcccaatgtatcaagattgctgcacagggacttgag
catgctattgcaggtgctagtctatatgttgtggggcctaatgattacatagaggatatc
aaagaatcttccatggcctatgtaaataaagtgatgagtaggattggcaaaagtggtaaa
ggggtgtgtgttcaggcatctacacttgggtctttagaagcattgctggacttcttggag
acgccggcagttaacataccggtgagtactataagtatcggtcctgtacacaagagggac
gtgaagaaggctagtgtcatgcttgagaagaaaaaggaatatgggactatactggctttt
gatgttaaagtagcaacagatgctcaggaacatgctgatgaacttggtgtcaaaattttc
actgctgacattatataccaccttttcgatcaattcaaggcacacatagatagtttcaag
ttggaaaagaagagagatgctgcaaaggatgcggttttcccctgtgtcctcaagatcata
ccagactgtgttttcaatacgaaagatccgattatcttgggagttgatgttgctgaaggc
attgctaagataattggcagcaaccctgaggagcaacagaaaatgttagggagacatttt
gaggtggaagacttgcttaaaagcaagatctcaaggcattcaattgatgtgcttaaagct
tactacaaggatgaagtgtctcccgaagatgtgagattacttacggatttgaaaaaagag
ttcgggataccatga
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