Salvia hispanica (chia): 125221997
Help
Entry
125221997 CDS
T09851
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
shis
Salvia hispanica (chia)
Pathway
shis03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125221997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125221997
03036 Chromosome and associated proteins [BR:
shis03036
]
125221997
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125221997
Coactivators
SAGA/TFTC/STAGA complex
125221997
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
125221997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
TAF10
Motif
Other DBs
NCBI-GeneID:
125221997
NCBI-ProteinID:
XP_047980324
LinkDB
All DBs
Position
4:29101081..29107603
Genome browser
AA seq
931 aa
AA seq
DB search
MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGNTSMQEDPSDSSAAALSQGSSHMT
SQFNPQWHTSSHDGTAKFQSGQDIANVGEKDQHSSEVELQRQDSGSQNRKEDDNTSHEPN
PNQQDERNTFPLPQPVGGQSSGEQPVDAQVLGHETKPDKELQMNKLQIVTHQPSMTVGSN
EQQTSMGINNDQVLPSLSQQTTGMSTTSQQAISPGMSNPQTMTSSSQQSVSALKLNKQVP
FGMLLPIIQPQLDKDRAMQLHTLYFKLKKNEISKDGFVRHMRSIVGDQMLKMAVYKLQTQ
AARNTQAAPNQFQPQPQAGRQMPSDLSNSISDSNATKSREMERQADSHGAQVGQLSTSTS
GLGHEMKHPAFPAQGINKQQHMQFSQTSFPTYGSAGSGYPPFQTTSAASSAPIRPQPHDS
QMRQAPSHPNMAVNHLGPASRPMNVTNMSTFDRSHSLTDPKKIPAGSLSHMNSKPALQQN
QVQWPPSTSKEQKNSITSSMTHVKQEPSDQLNEHQRLGSAASGNLNLKDESFDIQSSRTG
LTAPATLMPSSSVSSPSPSLMETNIMSSSRIPSLTTPVGLGSNSKAPLKKPMAGQKKPME
APGSSPPSSKKQKVSGSFVDQSIEHLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRR
VVQEEEEKLILQKIPLQKMMVEIMAKCGLKNMSSDVERCLSLCTEERMRGILSNVIRLSK
QRVDVEKSRHKTVITSDVRQQIMAINSKAREDWEKKQAETEKSQKLSESESSTGADGDKD
KDDSRGKSVKVNKEEDDKMRATAANVAVRAATGVGDITSRWQLMIEAKQKQGGSDTSSTP
QTNKDVGRKPLATSTRNTRENQESEKRDPSAALTTPASIRKVARNQVVVPRVARSVSVKD
VIAVLEREPQMAKSTLLYRLYNRVSADAPSE
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggaccctaacatcatgaaattcctcgaagaagacgaggatgaaactatgcattcgggc
gcagacgtggaggctttcacagcggaattgaacagagacattgaagggaatacttcgatg
caggaggatccctctgattccagtgccgcagccttgtctcaaggaagcagtcacatgaca
agtcagtttaatcctcagtggcacacatccagtcatgacgggactgctaaattccagagt
gggcaggatattgcaaacgtgggagaaaaggaccagcattcttctgaagtggagctgcaa
agacaggactccggctctcagaacagaaaagaggacgataacacctcccatgagcctaat
cccaaccagcaggacgaacggaacaccttccctttaccccaaccagtgggcgggcaatca
tccggagaacaacccgtcgatgcacaagttctgggtcatgaaacaaagccagacaaagaa
ttgcagatgaacaaattacaaattgttacccatcaaccatcaatgacagtgggatcaaat
gagcaacagacaagtatgggaatcaataatgaccaagtcttgccttcattgagtcagcaa
actacaggaatgtcaactactagtcaacaggcaatatccccagggatgagtaatccacag
accatgacgagcagtagtcaacagtctgttagtgcattaaaattgaacaaacaagttcct
tttggcatgttgcttcctatcatacaaccccaacttgacaaggacagagctatgcaactt
cacactctttactttaaattgaagaaaaatgaaatctctaaagatggatttgtccggcat
atgagaagtattgttggagaccagatgttaaaaatggctgtgtacaaactgcagactcag
gctgctaggaacacacaagctgctcctaatcaatttcaaccacagcctcaggccggacga
caaatgccttcagatttgagcaattcaataagtgacagtaatgcaactaaatcacgtgag
atggagaggcaagcagattcacatggagcacaagtaggccagttgtcaacttccacttca
ggtttaggtcatgagatgaagcatcctgcatttccagcacaggggattaataaacagcag
catatgcaattctcacagacatcttttccaacatatggaagtgctgggagtggttacccg
cctttccagacaactagtgctgcatcttctgcacctatccggccacaacctcatgattct
cagatgaggcaggctccatctcatcctaatatggctgttaatcacttggggccagcatcc
cggcccatgaatgtgacaaacatgtctacatttgataggtctcattctcttactgatcca
aagaaaattccagctggaagtttgtctcacatgaatagcaaaccagcgctgcaacaaaat
caagtccagtggccaccatccaccagcaaagaacagaaaaattctattacgtcatccatg
actcatgtaaagcaggaaccatcggatcagttaaatgaacaccaaagattgggcagtgct
gcttctgggaatctgaatttgaaggatgaatcttttgatatacaatcatcaagaacgggt
ctcacagcgcccgccactctgatgccatcaagctcagtttcctctccaagtcccagcctg
atggagaccaacattatgtcaagctctcggattccttctctaacaactcctgttggtctt
ggaagtaattccaaggctcccctcaaaaagcctatggctggccagaagaagccaatggaa
gcccctggctcttcacctccatcaagtaagaagcaaaaagtgtcgggatcctttgttgat
caaagcattgagcatctcaatgatgtgactgcagtgagcggagtcaacctcagggaggag
gaggaacaactcttttctggatccaaggaagacagccgggtttcagaggcatctcgacgg
gttgttcaagaagaagaagagaagttgatattgcagaagataccacttcagaaaatgatg
gtggagataatggcaaaatgtggtttaaagaatatgagtagtgatgtggagcgatgcttg
tccttgtgcacagaagagagaatgcgtggaatcctatctaacgtgatcagactttcaaaa
cagcgagttgatgtggagaagtcaaggcacaagactgttatcacctctgatgttcgacaa
cagattatggccataaattccaaagctcgtgaagattgggagaaaaagcaggctgaaact
gaaaagtcgcagaaactcagtgaatcggaaagtagtacaggagctgatggtgataaggat
aaggatgacagtcgtggaaagtcggtgaaggttaataaagaggaagatgataaaatgcgc
gcaacagctgcaaacgttgctgttcgagctgctactggagtgggtgatatcacatcaaga
tggcaattaatgattgaggccaagcagaaacagggagggtctgatacgtcatctactccc
cagactaacaaagacgtgggacgaaagcctttagcaacctctacaagaaacacaagggaa
aatcaagaatccgaaaagcgggatccttctgctgctctcacaactcctgcgtcaatcaga
aaagtggcacgaaatcaagttgttgtaccacgggtggctaggagcgtttcagtgaaggac
gtgattgctgtattagaaagagagcctcaaatggcaaaatccacattgctctaccgccta
tataacagggttagtgccgatgctcccagcgaataa
DBGET
integrated database retrieval system
