Salvia hispanica (chia): 125222154
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Entry
125222154 CDS
T09851
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
shis
Salvia hispanica (chia)
Pathway
shis04016
MAPK signaling pathway - plant
shis04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
125222154
04075 Plant hormone signal transduction
125222154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125222154
Transcription factors [BR:
shis03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
125222154
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
bHLH_INO4
Motif
Other DBs
NCBI-GeneID:
125222154
NCBI-ProteinID:
XP_047980592
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Position
4:complement(3982725..3985147)
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AA seq
631 aa
AA seq
DB search
MNQWPASSAAAAMDGDSAVMDAFSDLTSFWPSSHHQTPSYPLTPPSPPLPQFFNQETLQQ
RLLSLIEDAAHESWTYAIFWQSSVLDYGGAPVLGWGDGYYKGEDDKAKRRTASSPAEQEH
RKKVLRDLNSLIAGPQAVPDEAVDAVDEEVTDTEWFFLISMTQNFVNGSGLPGQALFTSS
PVWVTGPDRLASSPCERARQAQGFGLQTLVCIPSPNGVVELGSTEVIFQSSDLMKKVKSL
FNFNGPETGSASGPSSWSLPENDPAAMWLTEPSSSAVDVKDSAINNANTNQGSSIPSCIT
SNQPLLVKENPNSINSTTMNESQNQAYVSRELKFSEFGFDDSNPKNHGGSNQPLFRPESG
EILNFGESSKINTANSNVNLFGVETDSSKSNKMKKKSPTCRGSNEEGMLSFSSAPTKTDV
GIESDHSDLEASVVKEIESSTVVDPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQR
FYALRAVVPNVSKMDKASLLGDAIAYINELKSKLQNVEIARDDLRRQVESFKKEGGRHSA
PPEQGRTMVDIDVDVKIIGWDAMIRIQCSKKNHPAAKLMVALMELDLEVHHASVSVVNDL
MIQQATVKMEGRIFTQDQLKVALISKVAEAR
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagtggcctgctagcagcgccgccgcagccatggacggcgattccgccgtgatg
gacgccttctccgatctcacttccttctggccctcctctcaccaccaaaccccctcatac
cccctcacccctccctcccctcccctcccccaatttttcaaccaggagactctccagcag
cgcctgctctccttaatcgaggacgccgcccacgagagctggacctacgccattttctgg
cagtcctccgtcctcgactacggcggcgcgccggtcctcggctggggcgacggctactac
aaaggcgaggacgacaaggccaagcgccgcacagcctcctccccggccgagcaggagcac
cggaagaaggtcctccgcgatctcaattcgctgattgccggccctcaggctgtccccgac
gaagccgtcgacgccgtcgatgaggaagtcaccgacaccgagtggttcttcctgatttcc
atgactcagaattttgtcaacggctcaggcctcccgggccaggccttgttcacctccagc
ccggtctgggtcaccggcccggacaggctcgcctcttctccctgcgaacgggcccgccag
gcccagggcttcggccttcagacgctggtgtgcatcccctccccaaacggcgtcgttgag
cttggatccacggaggtgattttccagagctcggatctcatgaaaaaggtcaaatccttg
ttcaatttcaacgggccggaaacgggctccgcctccggcccgagctcctggtccttgccg
gagaacgatcctgccgcgatgtggctgacggagccgtcttcctccgctgtggatgtcaag
gattcggcgatcaacaacgccaacactaatcagggaagttcaatcccctcttgtattact
agcaatcaacctcttttagttaaggaaaaccctaattccatcaattccaccactatgaat
gagagccaaaaccaggcgtatgtttctagagagttgaaattctccgaattcgggttcgat
gatagcaatcccaaaaatcatggtggtagcaatcaacctctttttaggcctgaatcggga
gagatacttaatttcggagagagctccaagattaatactgcaaatagcaatgtgaatctg
tttggagttgagactgacagcagcaagagcaataagatgaagaaaaaatccccaacttgt
agaggtagtaacgaggaaggcatgctttccttctcatccgccccgacgaagaccgatgtt
ggcatcgaatccgatcactccgatctcgaggcatctgttgtcaaggaaatcgagtccagc
accgtggttgaccccgagaaacggcctagaaaacgtgggaggaagccagccaacgggcgc
gaggagcctctcaaccacgtggaggcggagaggcagagaagggagaagctcaaccagagg
ttctacgctctcagagctgtagtcccgaatgtgtcgaagatggacaaagcctccctcctt
ggagacgccattgcttacataaacgagctcaagtcaaagctccagaacgtggagatcgct
agggatgatctgaggaggcaggtcgagtccttcaaaaaggaagggggccgccactctgcc
cctccggagcagggccgcaccatggtggacatagacgtggacgtgaagatcattgggtgg
gacgcgatgatacgcatccagtgcagcaagaagaaccaccccgctgcaaagctgatggtg
gccctcatggagctggacctcgaagtgcaccatgccagcgtgtcggtggtgaacgatctg
atgatccagcaagcaacggtgaagatggagggtcggattttcacccaagatcagctcaag
gtagcgttgatatccaaagttgctgaagctcggtag
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