KEGG   Salvia hispanica (chia): 125222232
Entry
125222232         CDS       T09851                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
shis  Salvia hispanica (chia)
Pathway
shis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125222232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:shis03041]
    125222232
   03400 DNA repair and recombination proteins [BR:shis03400]
    125222232
Spliceosome [BR:shis03041]
 Complex B
  Other components
   Prp19 complex
    125222232
 Complex C
   Prp19-CDC5 complex
    125222232
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    125222232
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 125222232
NCBI-ProteinID: XP_047980696
LinkDB
Position
4:29375649..29379909
AA seq 868 aa
MRITIKGGVWKNTEDEILKASVMKYGKNQWARISSLLVRKSAKQCKTRWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYERLLDAACAKDENYEPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGINLRHKKRKRGGIDYNAEIPFEKRPPPGFYDIADEDRPAELVKFPT
TIEELEGERRVDNEARLRKQDIARNKIAERQDAPSAVLQANKLNDPEPVRKRSRLNLPAP
QIPDHELEAIAKMGSASDILGNEELTEGNAATRSLLASYAQTPRHGFTPGRTPQRTPAGK
QDAIMMEAENQRRLTLSQTPLLGGDNPMLHPSDFSGVTPKRKHIATPNPLMTPSATPGGP
GLTPRIGMTPTRDVYAVGLTPKGTSMRDELRINEDIDMLDSSKLRQSDSKKELIFSLKNL
PQPKNDYQIVIQPLAEEDEEPEEKIEEDMSDRIAREKAEEEARQQVLLKKRSKVLQRELP
RPPVVSLDLIRNTLMRADEDKSSVVPLTLVEQADELIRKELLSLLEHDNIKYPLDEKATK
EKKKGKRAAKENSVDVPTIDEFEEDELKEADKLIEDEVQYLRVAMGHENESFESYVEAHK
ACLDDMMYFPTRDGFGLASVATHAEKLSSLQNEFEHVKKMEDETKKAQRHEQKIKVLTNS
YQMRCNKLWAQVETTFKQMDAAGIELECFQALSKQETLAATYRISNLREEVQKQKDLERT
LQKRYGDRMAELERVQHLVNAHRLQAERDLENAAKDSDTTMDAIDVALQEPDAAEAAVTK
DTVEVESRSKDEMMLQKRMQHQPVVSCK
NT seq 2607 nt   +upstreamnt  +downstreamnt
atgaggattacgataaagggaggtgtgtggaagaacacagaagatgaaattctcaaggct
tcggttatgaaatatgggaaaaaccaatgggcaagaatttcttctttgttggtcaggaaa
tcggccaaacagtgcaagacacgctggtatgagtggctggatccctcaatcaaaaagact
gagtggacccgagaagaagatgagaagttattgcatttggcgaaactgatgcctacccag
tggaggacgattgcccctattgtcgggcgtactccatcacagtgcttggagagatatgaa
aggcttttggatgcagcctgtgccaaggatgagaactacgaacctggtgatgacccgaga
aaattgcgtcctggagagattgatcctaatccggaatcgaagcctgctcgtcctgatcct
gtagatatggatgaagatgaaaaggagatgctgtctgaagctcgggctcggttagccaac
actaggggtaagaaggcaaaaaggaaagcccgagagaaacagcttgaagaggctcgcagg
cttgcttcattgcagaaaagaagagagcttaaagctgctggaattaaccttcgccataag
aagagaaagagaggaggaatagattacaatgctgaaataccttttgaaaagagacctcca
cctggcttttatgatattgctgatgaagatcgacctgctgaattagtcaagtttccaaca
acgattgaggagttggaaggtgaaagaagagttgacaacgaggctcgattgaggaagcag
gacatcgcaagaaataaaatagcagagaggcaggatgctccgtctgcagttttgcaagca
aataaactcaatgatcctgagccagttcgcaaaaggtccaggttaaatctcccagcccca
cagattcctgaccatgagttggaggcaattgctaagatgggaagtgctagtgatattctt
gggaatgaagaacttacagaaggaaacgctgcaacacgttctcttcttgcaagttatgcc
cagactccgagacatggcttcactccagggagaacccctcaaaggactcctgcaggcaaa
caggatgccattatgatggaagcagagaaccagcggaggttgactttgtctcagactccg
ttgcttggtggggataatccgatgctgcacccttcagacttttctggggtgactcccaag
agaaagcatattgcaacaccaaatcctctaatgactccgtctgctactcctggaggccct
ggtctcactcccagaatcgggatgacacccacacgtgatgtatatgctgttggtttgact
ccaaaaggaacttcaatgagggatgagctgcgcataaatgaagatattgatatgcttgac
agttccaaactgagacagtctgattcaaaaaaggaactcattttcagtctgaaaaatctc
ccacaacccaagaatgactaccagatagttattcagccattggctgaagaggatgaagaa
cctgaagagaagatcgaggaagacatgtcggatagaattgctagagagaaggctgaggaa
gaagcaaggcaacaagtattactcaagaaaaggtcaaaagtactgcagagggagctgcca
agacctcctgtggtttcgttggacctcattagaaacactttgatgagagctgatgaagac
aagagttctgttgttccattaactttagttgagcaggctgatgaattaataagaaaggag
cttttgtctttgttagagcatgataatattaaatatcccctggatgagaaagcaacaaag
gagaagaagaaaggaaaacgtgctgcaaaagagaattctgtagatgtgccaacaattgac
gagtttgaagaagatgaactgaaagaggcagataaactaatagaagatgaggtccaatat
ctacgtgttgctatgggccatgagaatgaatcttttgaaagctatgtggaagcacataaa
gcatgcttagatgatatgatgtacttccctacacgtgatggcttcggtctagcaagtgtt
gccacccatgcggagaaactttcctccctgcagaatgaatttgaacatgtgaagaagatg
gaagatgagactaaaaaagcacaacggcatgagcagaagattaaagttctaactaatagt
tatcagatgaggtgtaacaaactttgggcacaagtggagacaaccttcaagcagatggac
gctgcgggaatcgagctagaatgcttccaagctttgagtaagcaagaaactctagcggca
acatacaggatcagcaacctcagggaagaggttcagaagcagaaggatctcgagcgcact
ttacagaaacggtacggcgatcggatggctgaactagaaagagttcagcatttggtaaat
gcacatagactgcaagcagaaagggatcttgaaaacgctgcaaaagacagcgacactacc
atggatgccattgacgtagcattgcaagagcccgatgcagctgaagcagctgtcaccaag
gacacagtcgaggtggaatcgagatccaaggatgaaatgatgttgcagaagagaatgcag
catcaaccagtggtgagttgcaagtag

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