Salvia hispanica (chia): 125222246
Help
Entry
125222246 CDS
T09851
Name
(RefSeq) polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00520
Amino sugar and nucleotide sugar metabolism
shis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
125222246
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
shis01003
]
125222246
Enzymes [BR:
shis01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
125222246
Glycosyltransferases [BR:
shis01003
]
Polysaccharide
Structural polysaccharide
125222246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
NTP_transf_5
Motif
Other DBs
NCBI-GeneID:
125222246
NCBI-ProteinID:
XP_047980715
LinkDB
All DBs
Position
4:29867537..29872827
Genome browser
AA seq
684 aa
AA seq
DB search
MAIKRASQSGGGKSKGIGSRVLASIFVFFLTFLALSFLFVGRGLFVTASSGHSELSILSS
RQQDLDWRGRLALQHLNSLFSKDVIDVINASANDLGPLNIDFFRKDKLSASWKVAGNKRS
ADNATSAEVTGEALKTKQEKSRFKEEHTSNEDNSIFFETPAKLARRQLREKRLEKRAADM
IKQDDEVTIKLENAAIERSKSVDSAVLGKYSIWRRDIDSENTDSTIRLIRDQMIMARVYT
SLARMKNKTDLANELQNRLKESQRSIGDANTDSDLHTSAPEKIKLMGQVLSKAKEELYNC
NLVTGKLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNGLHCLAMRLTIDYYLLPPEKRK
FPRSENLENPNLYHYALFSDNVLAASVVVNSAIMNAKDPGKHVFHLVTDKLNFGAMNMWF
LLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESAAMKEYYFKAAHPTTLSAGSSNLKYR
NPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWSVDLHGKVNGAVETCGES
FHRFDKYLNFSNPHISKNFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDRVLW
KLGTLPPGLITFYGLTHPLEKSWHVLGLGYNPSIDKTDIENAAVVHYNGNMKPWLELAMT
KYKPYWTKYVKYDHPYVRHCKLSE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcgattaagagggcatcacaatccggcggtggcaagagtaaaggcattggatctcgc
gtattagcttccatcttcgtgtttttcctcacattcctagccttatcctttctattcgtc
ggccgcggcctttttgtcaccgcctcttctggtcacagtgaattatcaatattgtccagc
agacagcaggatttagattggagaggaaggctggcattgcaacatcttaattctttattc
tcgaaagatgtgattgacgttattaatgccagtgcaaatgatttggggcctttaaatatc
gacttttttagaaaagataaattgtccgcctcttggaaagtagctgggaacaaaaggtct
gctgataatgccacttctgctgaggtcactggagaagctttgaagaccaaacaagaaaaa
tctagattcaaggaggaacatacttcaaatgaagataattccattttctttgagacacca
gctaaattggctcgaagacaactgagagaaaaaaggcttgaaaagcgtgctgctgacatg
ataaaacaagatgatgaagtgactataaagctggaaaatgctgccattgagcgttctaaa
tcagtggactctgcagttttagggaaatatagcatctggaggagagacattgatagtgaa
aacactgattcaactatacgcttgatacgtgatcaaatgataatggcaagggtatataca
agtcttgcaaggatgaaaaacaaaactgatttggccaatgagttgcagaatcggctcaag
gaaagccagcgttctataggagatgcaaatactgattctgatctgcacaccagtgcacct
gaaaagattaaactaatgggccaagtgctgtctaaagccaaagaggaattgtacaactgc
aaccttgtcactgggaaactaagagccatgctgcaatctgcggatgagcaagtcagaagt
ctgaaaaagcagagcacattccttagccagctagctgcaaagacaataccaaacgggctt
cactgtctggccatgcgcttgactatagattattacctcctcccacctgagaaaagaaag
ttccctcggagtgagaatctggaaaacccaaatctttaccattatgccctcttttcggat
aatgttcttgctgcttcagtagtggtcaactcagcaattatgaatgccaaggatcctggg
aaacacgttttccatcttgttactgataagttgaactttggtgcgatgaatatgtggttt
ctattgaatcccccgggtaaagctacaatccacgttgaaaatgtagatgaattcaagtgg
ctgaactcatcatattgtcctgttctacgtcagttggagtctgctgctatgaaagagtac
tatttcaaggcggctcatcccaccacactatctgctggttcctctaacctgaagtacagg
aacccaaagtatctttcaatgcttaaccatctaaggttctatctcccacaggtctatcca
aaattggacaaaattcttttccttgatgatgacattgttgttcagaaagacttgactggg
ctttggtcggttgatctccatggaaaagttaatggtgcagttgaaacatgtggtgagagc
ttccataggtttgacaaatatctgaacttctccaatcctcacatttctaagaactttgat
ccaaatgcttgtggatgggcatatggaatgaatatgttcgatctaaaggagtggaagaag
aaggatataaccggtatataccacaaatggcagaatatgaatgaagacagggtgctgtgg
aagcttgggactctacctccaggtctgattaccttttacgggctgactcatccactcgaa
aagtcatggcacgtgcttggtttgggttacaatcccagcattgacaagacagacatagag
aatgcagccgttgtacattacaatgggaacatgaaaccatggttagaactggcaatgacc
aagtataagccatattggaccaagtatgtaaagtacgaccacccatatgtacgccactgc
aaactgagcgaatga
DBGET
integrated database retrieval system
