Salvia hispanica (chia): 125222307
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Entry
125222307 CDS
T09851
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125222307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125222307
Spliceosome [BR:
shis03041
]
Common components
Common spliceosomal components
SR proteins
125222307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_YTH1
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
125222307
NCBI-ProteinID:
XP_047980794
LinkDB
All DBs
Position
4:complement(57900634..57904403)
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AA seq
257 aa
AA seq
DB search
MSRSSRTLYVGNLPGDVREREVEDLFYKYGPIVHIDLKIPPRPPGYAFVEFEESRDAEDA
IRGRDGYDFDGHRLRVELAHGGRGNSSSADRHTGSRGPRGGVSRRSEYRVLITGLPQSAS
WQDLKDHMRRAGDVCFSQVFHEGSGKTGIVDYTNFDDMKYAIKKLDGSEFRNAFSRGRVH
VKEYDSSRSRSRSRSRSRSPAYSKGRSNGRSKSKSPSVSRSRSRRFNTSASPKKRGLSRS
LSRSKSPSQSRSRSRSR
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctctagcagaactctctatgttggcaaccttcctggggacgttcgtgagcgc
gaggtggaggatcttttttacaagtatggaccaattgtgcatattgatcttaaaatcccc
ccaaggcctccaggctatgcttttgttgagtttgaagagtcaagggatgctgaagatgcc
atacgagggcgtgatggctatgattttgatgggcatcgcctacgggttgagctagcacat
ggtgggcgtggtaactcatcatcggcagatcgtcatactggaagtcgtggtccccgagga
ggagtttctaggcgctcagaatatagagttttaatcaccggcttgcctcagtcagcttca
tggcaagatcttaaggatcatatgcgtcgagctggagacgtttgcttctcacaagttttc
cacgaggggagtggaaagacagggatagtagactacacaaattttgatgacatgaaatat
gctatcaagaagctcgatggttctgagtttcggaatgctttctcacggggaagagtgcat
gtgaaagaatatgattccagtcgctctagaagccgcagccgcagtcgtagtcgcagtccg
gcctactcaaaaggaaggagcaatggtcgaagcaagagcaaaagcccaagtgttagccgt
agcaggagcagaaggttcaatacaagtgcaagtcccaaaaaacggggtttaagcagaagc
cttagccgtagcaagagcccaagccagagccgaagcaggagccgttccaggtga
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integrated database retrieval system
