Salvia hispanica (chia): 125222314
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Entry
125222314 CDS
T09851
Name
(RefSeq) two-component response regulator ORR21-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
shis
Salvia hispanica (chia)
Pathway
shis04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125222314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125222314
Transcription factors [BR:
shis03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
125222314
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Fn3_SaeA_4th
Motif
Other DBs
NCBI-GeneID:
125222314
NCBI-ProteinID:
XP_047980800
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Position
4:complement(5808308..5811708)
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AA seq
622 aa
AA seq
DB search
MACTSGGKLEVSQQFPVGLRVLVVDDDVICLRVVEQMLRKCLYNVTSCSQATVALNLLRE
RKGSFDVVLSDVHMPDMDGFKLLELVGLEMGLPVIMMSADGRTNLVMRGVRHGACDYLIK
PIRDEELKNIWQHVVRKKQNELRETDHSCSVEDHDRRKRVIDDTEYASSLNEGADADEVN
KMQKKRRDSKDEDDETDNDDPTTSKKARVVWSVELHQQFVTAVNQLGIDKAVPKRILEVM
NVPGLTRENVASHLQKFRLYLKRLSGVVHQQVGLASSYCGPVEQNLKLASLGRIEFQALA
ASGQLPPPTLAALHAELSRPTGNLILPGVDQRTLLHASLQGSKCVSVDRVAYAQPLIKCS
PNISKQSSQPLTSNGDVHPEFAAWSSKNLGDLVPACNLGTVTETDGLLTFVQQQQKQSTM
PEPSRSINVKPSCLVVPSQSSPNHQAGNSPASVNQNCSFRYSAVDHNNPLISSGLEQVLE
VECKAVSVPRDAASVSSTSSCSRNIQESCCQRVRSSASTINAVVQPPTMAFVQGSYNGKL
HLVQGSAGNPVYTGRGTSIPSRFAVNEHELQMCNLSQVRSYVESSSNKVKQEPNMDLMGS
VKLGTPVKQLFSQNDLMSVFSD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcacgagcggtggaaaattggaggtgtcgcagcagttcccggtggggctcagg
gttttagtagtggatgatgacgtcatctgcctccgcgttgtcgagcaaatgcttcgcaag
tgcttgtataatgttaccagttgttcgcaagctacagttgctttgaacttattgagggaa
aggaaaggctcttttgatgtagttctgagtgatgttcacatgccggatatggatggcttc
aaacttctcgagctagttggactggaaatgggccttcctgtgataatgatgtccgcggat
ggaaggactaatctggtcatgcgtggagtaaggcacggggcttgtgattacttaattaag
cctatcagggatgaagagttaaagaatatttggcagcatgttgttaggaaaaaacagaat
gaactgagagaaactgatcattcgtgtagcgtggaagaccatgatcgtcgaaaacgagtg
attgatgatactgaatatgcttcttctttgaatgaaggggcagatgctgacgaggttaat
aaaatgcaaaagaaaaggagagactcgaaagatgaagatgatgaaacggataacgatgac
cctaccacgtcaaagaaggctcgtgtagtttggtcagtagagctccatcagcaattcgtc
actgctgtaaatcagctcgggattgataaggctgtacccaagagaattcttgaagtgatg
aatgtccctgggttgacaagggagaatgttgctagtcatttacagaaatttagactatac
ttgaagaggttgagtggggtagttcatcaacaggttggccttgcttcttcttattgtggg
ccagtggagcagaatctgaaactagcctcgcttggaaggattgagtttcaagcattggca
gcttctggccaacttcctccaccgacattagcagcgctacatgctgagctttctcgaccc
acggggaacttaatcttgccaggggtggatcagagaactttgctacatgcatctcttcaa
gggtctaaatgtgtttcggtggatcgggttgcttatgcccaacctctgataaaatgttca
cccaacatttccaaacaaagttctcagcctcttacgtccaatggcgacgtacaccccgaa
tttgcagcctggtcgtcaaaaaaccttggcgatttggtaccagcctgcaatcttggcact
gtaacagaaacagatggtttgctaacctttgtacagcaacagcagaagcaatctacgatg
ccagagccaagtcgttcaatcaatgtgaaaccttcttgcttagtagttccatctcagtct
tcaccaaatcatcaagcaggaaatagccctgcttctgtcaatcaaaattgcagctttaga
tattctgcagtggatcataataatcccttgatctcgtcaggtcttgaacaagtcttggaa
gtggaatgtaaagcagtgagtgtgcctagggatgcagcttctgtttcatctacatcatct
tgctcaagaaatatacaagaaagttgttgtcaaagagttcggagctcagcctctacaatc
aacgcagttgtgcagcctcctaccatggcctttgtgcaaggttcttacaatggtaaactg
catttggtgcaaggatcagcagggaatcctgtatacacaggtagaggaacgtccatacct
agccgctttgctgtcaatgaacatgaattgcaaatgtgcaacctaagtcaagtgagatct
tatgttgagagcagtagcaacaaagtgaagcaagagccaaatatggatctgatgggaagt
gtaaaattggggactccagtaaagcagctcttttcccaaaatgatctgatgagtgttttc
tctgactag
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