Salvia hispanica (chia): 125222330
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Entry
125222330 CDS
T09851
Name
(RefSeq) 26S proteasome regulatory subunit 6B homolog
KO
K03063
26S proteasome regulatory subunit T3
Organism
shis
Salvia hispanica (chia)
Pathway
shis03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
125222330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
shis03051
]
125222330
Proteasome [BR:
shis03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
125222330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_16
AAA_5
AAA_lid_3
AAA_2
AAA_22
DUF815
RuvB_N
nSTAND3
AAA_28
NPHP3_N
TIP49
Mg_chelatase
AAA_14
RNA_helicase
Sigma54_activat
IstB_IS21
AAA_24
TsaE
AAA_7
AAA_18
Parvo_NS1
NTPase_1
AAA_30
NACHT
AAA_3
ATPase_2
AAA_25
DUF5906
AAA_33
DUF3450
NB-ARC
ATPase
ABC_tran
Clathrin
AAA_11
DUF6570
AAA_19
AAA_17
Motif
Other DBs
NCBI-GeneID:
125222330
NCBI-ProteinID:
XP_047980818
LinkDB
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Position
4:complement(40230519..40233202)
Genome browser
AA seq
415 aa
AA seq
DB search
MAASAMVLDPKPVPISEPPPSYPAVKSDVPAVDDEDLYGRLKSLQRQIEFIDIQEEYVKD
ELKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINREL
LKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYTDIGGCDIQKQEIREAVEL
PLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEG
PRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTV
NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDY
VSRPDKISAAEIAAICQEAGLHAVRKNRYVILPKDFEKGYRGNVKKPDTDFEFYK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttcggcaatggtgctcgatcctaagcctgtaccgatctccgaacctccgccg
tcttatccggccgtcaaatcggatgttcccgccgtcgacgatgaagatttgtacggacgg
cttaaatccttgcagcggcagatcgaattcatcgatattcaggaggagtacgtcaaggac
gaattgaaaaacctaaagcgggagcttcttagggcgcaggaggaagtgaagcggattcaa
tccgtgcccttggttatcggccaattcatggagatggttgatcagaacaacggcatcgtc
ggctccaccaccggctcgaattactacgtccggatcctgagcaccatcaaccgcgaacta
ctcaaaccctctgcctccgtcgcgctccaccgccattccaacgccttggtcgatgtcctg
cccccggaagctgactccagcatctcgcttctcagccaatctgagaagcctgatgtcaca
tacactgatattggtggatgtgatattcaaaagcaagagattcgtgaagctgttgagtta
cctctcactcaccacgaactgtacaagcagattggtattgatcctcctcgtggtgtgtta
ctttatggccctcctggtacagggaagaccatgcttgcaaaggctgtagcaaaccacaca
actgcagctttcattagagttgtgggttcggagtttgttcaaaaatatcttggagagggg
cctagaatggtccgtgatgtatttcgtctggcgaaggagaatgcacctgcaattatcttt
atagatgaggtagatgccattgcaacagcccgttttgatgcccaaactggagctgataga
gaggttcagaggattcttatggaacttctaaatcagatggatggcttcgatcaaactgtg
aatgtaaaggtcatcatggccactaatcgtgcggacactttggaccctgcacttctccgt
cctggtagacttgatcgtaaaatagaatttcctttgcctgataggcgccagaagagactt
gtttttcaggtttgtactgctaagatgaacttaagtgatgaagttgacttggaagactat
gtctctcgacctgataaaataagtgctgctgagattgcagctatatgtcaggaggcaggt
ctgcacgcggtgaggaaaaaccggtatgtgatacttcccaaggattttgagaaaggatac
agaggcaatgtcaagaagccagatactgattttgagttttacaagtaa
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