Salvia hispanica (chia): 125222560
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Entry
125222560 CDS
T09851
Name
(RefSeq) pleiotropic drug resistance protein 3-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
shis
Salvia hispanica (chia)
Pathway
shis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125222560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shis02000
]
125222560
Transporters [BR:
shis02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
125222560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
RsgA_GTPase
AAA_22
ABC_trans_N
AAA_29
AAA_30
AAA
AAA_23
ABC2_membrane_3
Rad17
AAA_16
AAA_25
AAA_18
AAA_33
TsaE
MMR_HSR1
AAA_28
AAA_14
AAA_17
AAA_15
NACHT
PduV-EutP
RNA_helicase
nSTAND3
FeoB_N
ORC-CDC6-like
AAA_19
cobW
ATPase_2
RuvB_N
NTPase_1
AAA_7
AAA_5
PilE_C
ABC_ATPase
AAA_11
Ploopntkinase3
NPHP3_N
T2SSE
Spore_III_AA
Motif
Other DBs
NCBI-GeneID:
125222560
NCBI-ProteinID:
XP_047981197
LinkDB
All DBs
Position
4:complement(16346226..16354766)
Genome browser
AA seq
1439 aa
AA seq
DB search
MDNFIGRDEIESFRNELSEIGRSFRSSIRRHSSSFRNDSALSSVIADEVVSQWAEIERLP
TYDRLRSSLFDEAGARKVVDVTKLGAPERHMFIEKLLKHIEHDNLRLLQKIRKRMDRVGV
KQPTIEVRYSNLCIAAECEVVDGKPLPTLWNSFKSLVSDVTRLPCMPTQEARVEIIKDVS
GIINPGRMTLLLGPPGCGKTTLLKALTGNLDKSLKVSGDISYNGYKLDEFVPQKTSAYIS
QDDLHIPEMTVRETLDFSARCQGIGSRAEIMAEVSRKEKEAKIVPDPEVDTYMKAISVEG
QRTSLQTNYILKILGLDICADTLFGDAMRRGISGGQKKRLTTGEMIVGPTKALFMDEISN
GLDSSTTYQIVCCLQQLAHISDATIVVSLLQPAPETFDLFDDVILMGEGKIVYHGPRSDV
LEFFRNCGFGCPERKGVADFLQEVISKKDQEQYWLETRQPYTYVSVDMFATKFKESVHGK
NLTKELSVPFDKSNSHKSAISFSVYSLSRWTLLRACMSREFLLMKRNAFMYVFKSAQLVF
IASVTMTVFLRTQMHVDLVHANDYLGALFYTLIILLIDGMPELSMTIERLPVFYKQRDLN
FYPAWAYAIPATILKIPMSLLEALIWTCLTYYVIGFSPEAGRFFRQMILVFAVHLTSSSM
FRFLAALFRTVDASTTAGSLAILFVTLFSGFMIPRPSMPVWLKWAFWVSPLSYGEIGLSS
NEFHAPRWQKDLTGNTTIGDQALANRGLDFSKDLFWVSVGALIGLTLLLNLGFALALSYL
KPAGSRAIISSDQLSKLKGNSKELDKKANIEGHSKVSPPRTSVKPHGDRMVLPFQPLSMV
FQDVQYYVDTPMAMKDHGYTQKRLQILCDITGAFKPGVLTALMGVSGAGKTTLLDVLSGR
KTSGTIEGEIKIGGYPKVQSTFSRISGYCEQTDIHSPQITVQESVIFSAWLRLDPQVEEK
TKYEFVKEVLETIELDNIKDSLVGLPGVDGLSTEQRKRLTIAVELVSNPSIIFMDEPTTG
LDARAAAIVMRAVRNVANTGRTIVCTIHQPSIDIFEAFDELVLLKAGGRMIYCGPLGHHS
SEVIKYFEAIPGVEKIRDNYNPAAWMLEVTSSSSEAELGLDFAEIYKKSSLHESNKELAN
KLSVPPAGSKDLHFSTRYPQNGWEQFKACLWKQHWSYWRSPKYNVMRSLHMIFAAFLFGL
VFWKQGKKVHNQQSLLTLLGSMYASTLFCGINNSSSVLPYVSTERTVLYREKFAGMYASW
AYSAAQVIVEIPYLFAQSVVFTVITYPMIGYHWSGYKVFFYIYTMFCTLLYFTYLGMLLI
AITPSFPVAAISQSAFYTMFNLFAGFLVPHPQIPRWWIWFYYMVPTSWSLNGMLNSQFGD
IDEKILVFGETKTVSAFLKDYFGYRHHLLPLVAVMLLFFPILFASLFGICISKLNFQRR
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggataacttcattggcagggacgagatcgagtcgttcaggaacgagctctccgagatt
ggcagaagcttcagatcgtcaatccgccgccactcatcgagctttcgcaacgattccgcc
ttgagctctgtaatcgccgatgaagtagtctctcagtgggcggagattgaaaggctgccg
acgtatgatcggctgagatcttcgctcttcgatgaagccggagctagaaaggtggttgat
gtcacgaagcttggcgcgccggagcggcacatgttcatcgaaaagcttctcaagcacatt
gagcacgataacctccgtcttctgcagaaaatcaggaagagaatggatagagttggggtg
aaacagcctactattgaggttaggtacagtaacttgtgcatagctgccgagtgtgaggtt
gttgatgggaagcccctgcctacactttggaactccttcaaaagtttggtttctgatgtc
accaggcttccctgtatgccaacacaagaggcccgtgtggaaatcataaaggatgtcagt
ggcatcatcaaccctggaagaatgactctattgcttggtcctccaggatgcggaaagact
acccttttgaaagccttaacaggaaatttagacaaatcgctcaaggtttcgggagatatc
tcgtacaatggatataaacttgatgagtttgtacctcagaagacatcagcttatataagc
caagatgatttgcatatcccagaaatgactgtacgggaaacacttgatttttcagctcgc
tgtcagggtattggtagcagagcagaaattatggctgaggttagcagaaaggagaaagaa
gccaaaattgttcctgatccagaagtggatacttacatgaaggcaatttctgtggaagga
caaaggacttctcttcagacaaactacatattgaaaattcttggccttgatatatgtgct
gatacactctttggagatgccatgagaagaggaatatctggtggccagaagaagagactt
actacaggtgagatgatagttggaccaacaaaagccttatttatggatgaaatctcgaat
ggtctagacagctcaaccacatatcagatagtttgttgtcttcaacaacttgcacacatc
tcagatgctacaatagttgtttctcttctccagcctgcaccagaaacatttgatctcttt
gatgacgtaattttgatgggtgagggaaaaattgtttatcatggacctcgaagtgatgtc
ttagagttctttagaaattgcggatttgggtgccctgagaggaaaggagtggctgatttt
ctccaggaggttatttctaagaaagatcaggaacaatactggctggagacacgacaacct
tacacttatgtgtcagttgatatgtttgcgacgaaatttaaggaatctgtgcatggaaag
aatcttactaaggaactttctgtaccatttgataagtcgaatagccacaagagtgccatt
agttttagtgtgtattctctttccagatggactcttttaagagcttgtatgtcgagagag
tttcttctgatgaaacgaaatgcttttatgtatgttttcaaatcagctcagcttgtcttc
attgcttctgtaacaatgactgtattcctgaggacgcaaatgcacgttgatcttgtccat
gcaaatgattacttgggagctctattttacactctcattattcttcttatagatggaatg
ccagagctctccatgactatagaaaggcttccagtattctacaaacaaagggacttgaac
ttttaccctgcatgggcatacgcgattccagcaaccatcctgaaaattcctatgtcattg
ctggaagctctaatctggacatgtcttacttattacgttattggttttagccctgaggct
gggaggttctttcgccagatgattttagtttttgctgtgcacttgacctcatcatctatg
ttccgattcctagcagctctctttcggactgtagatgcatctacaacagctggaagtttg
gccatactgtttgtgacattattcagtggctttatgatcccacggccatctatgccagtt
tggttgaagtgggcattttgggtttctcctctttcatatggtgagataggcctttcatcc
aatgagtttcatgctccgagatggcaaaaggatctgacaggaaatacaaccataggagac
caagcacttgcaaaccgtggattagacttcagtaaagatctcttttgggtatccgtgggt
gcccttatcgggctaacactgctcttgaaccttggttttgcattggcattgagttactta
aaacctgctggttctcgtgctattatttcaagtgaccaactttcaaagctaaagggtaat
agtaaagaactggataaaaaagctaatattgaagggcattccaaagtttctcctcctaga
accagtgtaaaacctcatggagacagaatggttttaccctttcaaccattgagtatggta
ttccaagatgtccagtactatgtggacaccccaatggccatgaaggaccatggttacact
caaaaaaggcttcagatcctttgtgatatcactggtgcattcaagcctggtgttctcaca
gcactcatgggtgtcagtggggctgggaaaacgacgcttctagacgtactttctggcagg
aaaactagtggcaccatcgaaggagaaataaaaattggagggtatcctaaagtccagagt
acattttctcggatttcaggttactgtgaacaaactgatatacattctccgcaaattact
gtgcaagaatcagttattttttctgcatggcttcgtcttgatccacaagttgaggaaaaa
acaaaatatgaatttgtcaaagaagtccttgaaaccattgagcttgacaacatcaaagat
tcgttagtgggcttgccgggtgttgatggtctgtcaactgagcaaaggaaacggctaaca
atagctgtggaactagtttctaatccctccattatctttatggatgaacctaccactgga
ctggatgccagagcagcagcaattgttatgcgggcagtgaggaacgtggcaaatacggga
agaaccattgtgtgcaccattcaccagccgagtattgacatttttgaagcatttgatgag
ttagtactattgaaagctggaggtcgcatgatctattgtgggccattaggtcatcattct
tctgaagtgattaaatattttgaggcaatccctggtgtggaaaaaatcagagataactac
aatccagctgcatggatgttggaagtcacttcatcttcctcagaagctgaacttggctta
gactttgctgagatttacaagaaatccagtttgcatgagagtaacaaagagcttgcaaat
aagctcagcgtaccacctgctggatcaaaagatttgcatttctcaacccgctatccgcaa
aatggttgggagcaattcaaagcttgcctatggaagcagcactggtcttactggaggagt
cctaagtacaacgtgatgcgctcgcttcatatgatttttgcagcttttcttttcggcttg
gtgttctggaaacaaggcaaaaaagtacataatcagcagagtctattaactctgctgggc
tcaatgtatgcctccacgctattctgtggtataaacaactcctcttcagtccttccatat
gttagcaccgagcgaactgttctctacagagaaaagtttgctggaatgtatgcttcgtgg
gcttactcagccgcgcaggtcattgtcgagattccatatctgtttgcacaatcagttgta
ttcacggtcatcacatatccgatgatcggataccactggtctggatacaaggtgttcttc
tacatttacaccatgttctgcacgctgctatacttcacctacctcggaatgctgctgatt
gccataacaccaagctttccagtggctgccatttcgcagtcggccttttacacaatgttc
aatctgtttgccggattcttggtccctcacccgcaaattccgaggtggtggatatggttt
tattatatggttccgacttcgtggtcgttgaatggcatgcttaattcacaatttggtgat
atagatgagaagatcttggtgtttggagagaccaaaacagtatcagcctttttgaaggat
tattttggatatcgacaccatcttctacctcttgttgctgtcatgttgttgttctttcct
attctttttgcttctctttttggaatttgtatttccaagttgaactttcaaaggaggtaa
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integrated database retrieval system
